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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=69)
ETQQKVQDLETRNAELEHQLRAERSLEEARAERERARAEVGRAAQLLDVSLFELSELREG
LARLAEAAP

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3cvf-a3-m1-cB 69 69 1.0000 1.0000 1.0000 4.10e-40 3cvf-a3-m1-cA_3cvf-a3-m1-cB
2 3cvf-a3-m1-cA 69 69 1.0000 1.0000 1.0000 4.10e-40 3cvf-a3-m1-cA_3cvf-a3-m1-cB
3 3cvf-a1-m1-cB 69 69 1.0000 1.0000 1.0000 4.10e-40 3cvf-a1-m1-cB_3cvf-a1-m1-cD
4 3cvf-a1-m1-cA 69 69 1.0000 1.0000 1.0000 4.10e-40 3cvf-a1-m1-cA_3cvf-a1-m1-cD
5 3cvf-a1-m1-cD 71 69 1.0000 0.9718 1.0000 4.33e-40 3cvf-a1-m1-cA_3cvf-a1-m1-cD, 3cvf-a1-m1-cB_3cvf-a1-m1-cD
6 3cve-a3-m1-cC 64 63 0.3768 0.4062 0.4127 5.15e-10 3cve-a3-m1-cD_3cve-a3-m1-cC
7 3cve-a1-m1-cB 64 63 0.3768 0.4062 0.4127 5.15e-10 3cve-a1-m1-cD_3cve-a1-m1-cB
8 3cve-a1-m1-cA 66 63 0.3768 0.3939 0.4127 5.45e-10 3cve-a1-m1-cD_3cve-a1-m1-cA
9 3cve-a3-m1-cD 60 59 0.3478 0.4000 0.4068 7.23e-09 3cve-a3-m1-cD_3cve-a3-m1-cC
10 3cve-a1-m1-cD 60 59 0.3478 0.4000 0.4068 7.23e-09 3cve-a1-m1-cD_3cve-a1-m1-cA, 3cve-a1-m1-cD_3cve-a1-m1-cB
11 1jsd-a2-m3-cB 160 39 0.2029 0.0875 0.3590 1.8 1jsd-a2-m2-cB_1jsd-a2-m3-cB
12 1jsd-a2-m2-cB 160 39 0.2029 0.0875 0.3590 1.8 1jsd-a2-m2-cB_1jsd-a2-m3-cB
13 7n61-a1-m1-c0A 467 73 0.3188 0.0471 0.3014 3.2 7n61-a1-m1-c0A_7n61-a1-m1-c0D
14 7n61-a1-m1-c0D 476 73 0.3188 0.0462 0.3014 3.4 7n61-a1-m1-c0A_7n61-a1-m1-c0D
15 5eyo-a2-m2-cC 88 29 0.2174 0.1705 0.5172 4.3 5eyo-a2-m1-cC_5eyo-a2-m2-cC
16 5eyo-a2-m1-cC 88 29 0.2174 0.1705 0.5172 4.3 5eyo-a2-m1-cC_5eyo-a2-m2-cC
17 4a27-a1-m1-cA 314 20 0.1449 0.0318 0.5000 8.4 4a27-a1-m1-cB_4a27-a1-m1-cA
18 4a27-a1-m1-cB 309 20 0.1449 0.0324 0.5000 8.7 4a27-a1-m1-cB_4a27-a1-m1-cA
19 2oqq-a2-m2-cB 42 20 0.1449 0.2381 0.5000 9.0 2oqq-a2-m1-cB_2oqq-a2-m2-cB, 2oqq-a2-m2-cA_2oqq-a2-m2-cB
20 2oqq-a2-m2-cA 42 20 0.1449 0.2381 0.5000 9.0 2oqq-a2-m1-cA_2oqq-a2-m2-cA, 2oqq-a2-m2-cA_2oqq-a2-m2-cB
21 2oqq-a2-m1-cB 42 20 0.1449 0.2381 0.5000 9.0 2oqq-a2-m1-cB_2oqq-a2-m2-cB
22 2oqq-a2-m1-cA 42 20 0.1449 0.2381 0.5000 9.0 2oqq-a2-m1-cA_2oqq-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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