Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=88)
ETSGEGAVLFGQHCAGCHVNGGNIIRRGKNLKLATLKRQGLDSTEAIASIARKGIGQMSG
YGDKLGEGGDQLVAGWILEQAQNAWTQG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4kmg-a2-m2-cA 88 88 1.0000 1.0000 1.0000 3.00e-59 4kmg-a2-m1-cA_4kmg-a2-m2-cA
2 4kmg-a2-m1-cA 88 88 1.0000 1.0000 1.0000 3.00e-59 4kmg-a2-m1-cA_4kmg-a2-m2-cA
3 2dge-a2-m2-cD 100 93 0.3750 0.3300 0.3548 3.70e-13 2dge-a2-m2-cD_2dge-a2-m2-cB
4 2dge-a1-m1-cD 100 93 0.3750 0.3300 0.3548 3.70e-13 2dge-a1-m1-cD_2dge-a1-m1-cA
5 2dge-a2-m2-cB 102 93 0.3750 0.3235 0.3548 4.18e-13 2dge-a2-m1-cA_2dge-a2-m2-cB, 2dge-a2-m2-cD_2dge-a2-m2-cB
6 2dge-a2-m1-cA 102 93 0.3750 0.3235 0.3548 4.18e-13 2dge-a2-m1-cA_2dge-a2-m2-cB
7 2dge-a1-m1-cA 102 93 0.3750 0.3235 0.3548 4.18e-13 2dge-a1-m1-cD_2dge-a1-m1-cA
8 2v08-a1-m3-cB 84 80 0.2955 0.3095 0.3250 1.57e-10 2v08-a1-m1-cA_2v08-a1-m3-cB, 2v08-a1-m2-cB_2v08-a1-m3-cB, 2v08-a1-m3-cA_2v08-a1-m3-cB
9 2v08-a1-m3-cA 84 80 0.2955 0.3095 0.3250 1.57e-10 2v08-a1-m3-cA_2v08-a1-m3-cB
10 2v08-a1-m2-cB 84 80 0.2955 0.3095 0.3250 1.57e-10 2v08-a1-m2-cB_2v08-a1-m3-cB
11 2v08-a1-m1-cA 84 80 0.2955 0.3095 0.3250 1.57e-10 2v08-a1-m1-cA_2v08-a1-m3-cB
12 2zbo-a7-m1-cK 86 80 0.2614 0.2674 0.2875 5.22e-09 2zbo-a7-m1-cA_2zbo-a7-m1-cK, 2zbo-a7-m1-cC_2zbo-a7-m1-cK, 2zbo-a7-m1-cI_2zbo-a7-m1-cK
13 2zbo-a7-m1-cI 86 80 0.2614 0.2674 0.2875 5.22e-09 2zbo-a7-m1-cI_2zbo-a7-m1-cK
14 2zbo-a7-m1-cE 86 80 0.2614 0.2674 0.2875 5.22e-09 2zbo-a7-m1-cC_2zbo-a7-m1-cE
15 2zbo-a7-m1-cC 86 80 0.2614 0.2674 0.2875 5.22e-09 2zbo-a7-m1-cC_2zbo-a7-m1-cE, 2zbo-a7-m1-cC_2zbo-a7-m1-cK
16 2zbo-a7-m1-cA 86 80 0.2614 0.2674 0.2875 5.22e-09 2zbo-a7-m1-cA_2zbo-a7-m1-cK
17 1c6o-a1-m1-cB 89 74 0.2500 0.2472 0.2973 5.93e-04 1c6o-a1-m1-cA_1c6o-a1-m1-cB
18 1c6o-a1-m1-cA 89 74 0.2500 0.2472 0.2973 5.93e-04 1c6o-a1-m1-cA_1c6o-a1-m1-cB
19 1txg-a1-m1-cB 335 36 0.1591 0.0418 0.3889 0.25 1txg-a1-m1-cA_1txg-a1-m1-cB
20 1txg-a1-m1-cA 335 36 0.1591 0.0418 0.3889 0.25 1txg-a1-m1-cA_1txg-a1-m1-cB
21 4lji-a1-m1-cA 133 32 0.1364 0.0902 0.3750 1.3 4lji-a1-m1-cB_4lji-a1-m1-cA
22 4lji-a1-m1-cB 131 32 0.1364 0.0916 0.3750 1.3 4lji-a1-m1-cB_4lji-a1-m1-cA
23 5kh0-a2-m1-cD 356 20 0.1023 0.0253 0.4500 4.0 5kh0-a2-m1-cC_5kh0-a2-m1-cD
24 5kh0-a2-m1-cC 356 20 0.1023 0.0253 0.4500 4.0 5kh0-a2-m1-cC_5kh0-a2-m1-cD
25 1l9n-a1-m1-cB 673 31 0.1250 0.0163 0.3548 5.7 1l9n-a1-m1-cA_1l9n-a1-m1-cB
26 1l9n-a1-m1-cA 673 31 0.1250 0.0163 0.3548 5.7 1l9n-a1-m1-cA_1l9n-a1-m1-cB
27 2ctz-a3-m2-cB 421 109 0.3750 0.0784 0.3028 7.0 2ctz-a3-m1-cA_2ctz-a3-m2-cB
28 2ctz-a3-m1-cA 421 109 0.3750 0.0784 0.3028 7.0 2ctz-a3-m1-cA_2ctz-a3-m2-cB
29 2ctz-a2-m2-cB 421 109 0.3750 0.0784 0.3028 7.0 2ctz-a2-m1-cB_2ctz-a2-m2-cB, 2ctz-a2-m2-cA_2ctz-a2-m2-cB
30 2ctz-a2-m2-cA 421 109 0.3750 0.0784 0.3028 7.0 2ctz-a2-m2-cA_2ctz-a2-m2-cB
31 2ctz-a2-m1-cB 421 109 0.3750 0.0784 0.3028 7.0 2ctz-a2-m1-cB_2ctz-a2-m2-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600