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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
ETVPELPEDYEISEKTIITPIGVLKSAFENNIIIHAVLKEGSIFCLEDRTLIGLTEVFGP
LQNPFYRIKLPDSKKNLFDELKVRLGEKAFIVT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2v3m-a2-m1-cD 93 93 1.0000 1.0000 1.0000 4.96e-63 2v3m-a2-m1-cD_2v3m-a2-m1-cC
2 2v3m-a3-m1-cE 99 99 1.0000 0.9394 0.9394 1.84e-60 2v3m-a3-m1-cB_2v3m-a3-m1-cE
3 2v3m-a2-m1-cC 99 99 1.0000 0.9394 0.9394 1.84e-60 2v3m-a2-m1-cD_2v3m-a2-m1-cC
4 2v3m-a3-m1-cB 85 91 0.9140 1.0000 0.9341 1.07e-54 2v3m-a3-m1-cB_2v3m-a3-m1-cE
5 7jz6-a1-m1-cD 662 52 0.1720 0.0242 0.3077 1.6 7jz6-a1-m1-cB_7jz6-a1-m1-cD, 7jz6-a1-m1-cC_7jz6-a1-m1-cD
6 7jz6-a1-m1-cC 662 52 0.1720 0.0242 0.3077 1.6 7jz6-a1-m1-cC_7jz6-a1-m1-cD
7 7jz6-a1-m1-cB 662 52 0.1720 0.0242 0.3077 1.6 7jz6-a1-m1-cB_7jz6-a1-m1-cD
8 6jcn-a1-m1-cB 207 27 0.1075 0.0483 0.3704 4.5 6jcn-a1-m1-cA_6jcn-a1-m1-cB
9 6jcn-a1-m1-cA 207 27 0.1075 0.0483 0.3704 4.5 6jcn-a1-m1-cA_6jcn-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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