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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=39)
EVDDRVSALEQRLQLQEDELAVLKAALADALRRLRACEE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4cgb-a2-m1-cF 45 39 1.0000 0.8667 1.0000 3.31e-19 4cgb-a2-m1-cD_4cgb-a2-m1-cF, 4cgb-a2-m1-cE_4cgb-a2-m1-cF
2 4cgb-a2-m1-cD 45 39 1.0000 0.8667 1.0000 3.31e-19 4cgb-a2-m1-cD_4cgb-a2-m1-cF
3 4cgb-a2-m1-cE 39 39 1.0000 1.0000 1.0000 4.26e-19 4cgb-a2-m1-cE_4cgb-a2-m1-cF
4 4cgc-a1-m1-cC 28 26 0.4615 0.6429 0.6923 0.004 4cgc-a1-m1-cA_4cgc-a1-m1-cC
5 4cgc-a1-m1-cA 27 26 0.4615 0.6667 0.6923 0.004 4cgc-a1-m1-cA_4cgc-a1-m1-cC
6 6gap-a1-m1-cB 214 35 0.3590 0.0654 0.4000 0.31 6gap-a1-m1-cC_6gap-a1-m1-cB
7 6gap-a1-m1-cC 213 38 0.3590 0.0657 0.3684 0.32 6gap-a1-m1-cC_6gap-a1-m1-cB
8 7vey-a2-m1-cD 396 29 0.2564 0.0253 0.3448 4.2 7vey-a2-m1-cD_7vey-a2-m1-cB
9 7vey-a2-m1-cB 398 29 0.2564 0.0251 0.3448 4.2 7vey-a2-m1-cD_7vey-a2-m1-cB
10 7rro-a1-m1-cF1 421 23 0.3077 0.0285 0.5217 5.5 7rro-a1-m1-cF0_7rro-a1-m1-cF1
11 7ung-a1-m1-cC2 393 23 0.3077 0.0305 0.5217 6.3 7ung-a1-m1-cC1_7ung-a1-m1-cC2

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Reference:
Jacob Schwartz et al.

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