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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=97)
EVVHFLEGVCFEKLHIEVLNENSSHKEIRICMPKGAVMDKHKAPGAISVQVLEGKIVFEV
GDEKIEMPKGALISLEAQVLHRLDALENSVIRLSLSK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5j4f-a1-m1-cB 97 97 1.0000 1.0000 1.0000 1.16e-65 5j4f-a1-m1-cB_5j4f-a1-m1-cA
2 5j4f-a1-m1-cA 98 97 1.0000 0.9898 1.0000 1.25e-65 5j4f-a1-m1-cB_5j4f-a1-m1-cA
3 3fjs-a2-m1-cD 100 63 0.1856 0.1800 0.2857 0.003 3fjs-a2-m1-cD_3fjs-a2-m1-cC
4 3fjs-a2-m1-cC 105 63 0.1856 0.1714 0.2857 0.003 3fjs-a2-m1-cD_3fjs-a2-m1-cC
5 2q30-a3-m1-cF 102 92 0.2474 0.2353 0.2609 0.53 2q30-a3-m1-cE_2q30-a3-m1-cF
6 2q30-a3-m1-cE 102 92 0.2474 0.2353 0.2609 0.53 2q30-a3-m1-cE_2q30-a3-m1-cF
7 1gqh-a1-m1-cD 331 19 0.1031 0.0302 0.5263 0.88 1gqh-a1-m1-cD_1gqh-a1-m1-cB
8 1gqh-a1-m1-cB 334 19 0.1031 0.0299 0.5263 0.88 1gqh-a1-m1-cD_1gqh-a1-m1-cB
9 4nl5-a2-m1-cA 101 25 0.1340 0.1287 0.5200 1.0 4nl5-a2-m2-cB_4nl5-a2-m1-cA
10 4nl5-a2-m2-cB 100 25 0.1340 0.1300 0.5200 1.0 4nl5-a2-m2-cB_4nl5-a2-m1-cA
11 5uq4-a1-m1-cB 90 25 0.1340 0.1444 0.5200 1.2 5uq4-a1-m1-cA_5uq4-a1-m1-cB
12 5uq4-a1-m1-cA 86 25 0.1340 0.1512 0.5200 1.3 5uq4-a1-m1-cA_5uq4-a1-m1-cB
13 8awp-a1-m1-cA 104 49 0.1649 0.1538 0.3265 6.2 8awp-a1-m1-cA_8awp-a1-m1-cB
14 8awp-a1-m1-cB 111 49 0.1649 0.1441 0.3265 8.7 8awp-a1-m1-cA_8awp-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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