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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=26)
EVYKLDANVKRLEKEVGKLEGEVARL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4dac-a6-m3-cD 26 26 1.0000 1.0000 1.0000 3.15e-11 4dac-a6-m2-cD_4dac-a6-m3-cD
2 4dac-a6-m2-cD 26 26 1.0000 1.0000 1.0000 3.15e-11 4dac-a6-m2-cD_4dac-a6-m3-cD
3 1z0u-a1-m2-cB 249 22 0.4615 0.0482 0.5455 0.62 1z0u-a1-m1-cB_1z0u-a1-m2-cB, 1z0u-a1-m2-cA_1z0u-a1-m2-cB
4 1z0u-a1-m2-cA 249 22 0.4615 0.0482 0.5455 0.62 1z0u-a1-m2-cA_1z0u-a1-m2-cB
5 1z0u-a1-m1-cB 249 22 0.4615 0.0482 0.5455 0.62 1z0u-a1-m1-cB_1z0u-a1-m2-cB
6 3w8v-a1-m1-cC 32 25 0.5385 0.4375 0.5600 0.63 3w8v-a1-m1-cB_3w8v-a1-m1-cC
7 3w8v-a1-m1-cB 32 25 0.5385 0.4375 0.5600 0.63 3w8v-a1-m1-cB_3w8v-a1-m1-cC
8 4r8o-a3-m1-cB 92 24 0.3846 0.1087 0.4167 6.7 4r8o-a3-m1-cA_4r8o-a3-m1-cB
9 4r8o-a3-m1-cA 92 24 0.3846 0.1087 0.4167 6.7 4r8o-a3-m1-cA_4r8o-a3-m1-cB
10 4cgk-a1-m2-cA 351 26 0.4615 0.0342 0.4615 8.7 4cgk-a1-m2-cB_4cgk-a1-m2-cA
11 4cgk-a1-m1-cA 351 26 0.4615 0.0342 0.4615 8.7 4cgk-a1-m2-cB_4cgk-a1-m1-cA
12 4cgk-a1-m2-cB 348 26 0.4615 0.0345 0.4615 8.7 4cgk-a1-m1-cB_4cgk-a1-m2-cB, 4cgk-a1-m2-cB_4cgk-a1-m1-cA, 4cgk-a1-m2-cB_4cgk-a1-m2-cA
13 4cgk-a1-m1-cB 348 26 0.4615 0.0345 0.4615 8.7 4cgk-a1-m1-cB_4cgk-a1-m2-cB

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Reference:
Jacob Schwartz et al.

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