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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=22)
EWAREIGAQLRRIADDLNAQYE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2vof-a1-m1-cB 23 22 1.0000 0.9565 1.0000 9.37e-10 2vof-a1-m1-cD_2vof-a1-m1-cB
2 2vof-a1-m1-cD 22 22 1.0000 1.0000 1.0000 9.76e-10 2vof-a1-m1-cD_2vof-a1-m1-cB
3 2zy2-a1-m9-cA 521 17 0.4545 0.0192 0.5882 1.8 2zy2-a1-m11-cA_2zy2-a1-m9-cA, 2zy2-a1-m12-cA_2zy2-a1-m9-cA, 2zy2-a1-m8-cA_2zy2-a1-m9-cA
4 2zy2-a1-m8-cA 521 17 0.4545 0.0192 0.5882 1.8 2zy2-a1-m8-cA_2zy2-a1-m9-cA
5 2zy2-a1-m12-cA 521 17 0.4545 0.0192 0.5882 1.8 2zy2-a1-m12-cA_2zy2-a1-m9-cA
6 2zy2-a1-m11-cA 521 17 0.4545 0.0192 0.5882 1.8 2zy2-a1-m11-cA_2zy2-a1-m9-cA
7 6j0z-a1-m2-cC 488 11 0.3636 0.0164 0.7273 1.8 6j0z-a1-m1-cC_6j0z-a1-m2-cC
8 6j0z-a1-m1-cC 488 11 0.3636 0.0164 0.7273 1.8 6j0z-a1-m1-cC_6j0z-a1-m2-cC
9 3fdd-a1-m9-cA 502 16 0.4545 0.0199 0.6250 4.2 3fdd-a1-m6-cA_3fdd-a1-m9-cA
10 3fdd-a1-m6-cA 502 16 0.4545 0.0199 0.6250 4.2 3fdd-a1-m6-cA_3fdd-a1-m9-cA
11 2zy4-a1-m2-cE 509 17 0.4091 0.0177 0.5294 7.5 2zy4-a1-m1-cE_2zy4-a1-m2-cE, 2zy4-a1-m2-cE_2zy4-a1-m1-cC
12 2zy4-a1-m1-cE 509 17 0.4091 0.0177 0.5294 7.5 2zy4-a1-m1-cE_2zy4-a1-m2-cE
13 2zy4-a1-m1-cC 511 17 0.4091 0.0176 0.5294 7.8 2zy4-a1-m2-cE_2zy4-a1-m1-cC
14 4nzj-a2-m2-cA 456 17 0.2727 0.0132 0.3529 8.2 4nzj-a2-m1-cA_4nzj-a2-m2-cA
15 4nzj-a2-m1-cA 456 17 0.2727 0.0132 0.3529 8.2 4nzj-a2-m1-cA_4nzj-a2-m2-cA

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Reference:
Jacob Schwartz et al.

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