Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=31)
EYFFLKIRGRERFEMFRELNEALELKDAQAG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2j10-a1-m1-cC 31 31 1.0000 1.0000 1.0000 9.96e-16 2j10-a1-m1-cB_2j10-a1-m1-cC
2 2j10-a1-m1-cB 31 31 1.0000 1.0000 1.0000 9.96e-16 2j10-a1-m1-cB_2j10-a1-m1-cC
3 5xzc-a2-m1-cE 232 31 0.9355 0.1250 0.9355 5.32e-15 5xzc-a2-m1-cC_5xzc-a2-m1-cE
4 5xzc-a2-m1-cD 232 31 0.9355 0.1250 0.9355 5.32e-15 5xzc-a2-m1-cB_5xzc-a2-m1-cD
5 5xzc-a2-m1-cC 232 31 0.9355 0.1250 0.9355 5.32e-15 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cC_5xzc-a2-m1-cE
6 5xzc-a2-m1-cB 232 31 0.9355 0.1250 0.9355 5.32e-15 5xzc-a2-m1-cB_5xzc-a2-m1-cC, 5xzc-a2-m1-cB_5xzc-a2-m1-cD
7 1sak-a1-m1-cD 42 31 0.9355 0.6905 0.9355 2.06e-14 1sak-a1-m1-cB_1sak-a1-m1-cD, 1sak-a1-m1-cC_1sak-a1-m1-cD
8 1sak-a1-m1-cC 42 31 0.9355 0.6905 0.9355 2.06e-14 1sak-a1-m1-cC_1sak-a1-m1-cD
9 1sak-a1-m1-cB 42 31 0.9355 0.6905 0.9355 2.06e-14 1sak-a1-m1-cB_1sak-a1-m1-cD
10 1pet-a1-m1-cD 31 30 0.9032 0.9032 0.9333 2.24e-13 1pet-a1-m1-cA_1pet-a1-m1-cD
11 1pet-a1-m1-cA 31 30 0.9032 0.9032 0.9333 2.24e-13 1pet-a1-m1-cA_1pet-a1-m1-cD
12 1hs5-a1-m1-cB 34 31 0.8710 0.7941 0.8710 1.71e-12 1hs5-a1-m1-cA_1hs5-a1-m1-cB
13 1hs5-a1-m1-cA 34 31 0.8710 0.7941 0.8710 1.71e-12 1hs5-a1-m1-cA_1hs5-a1-m1-cB
14 3q01-a1-m1-cB 233 31 0.8710 0.1159 0.8710 2.04e-12 3q01-a1-m1-cA_3q01-a1-m1-cB
15 3q01-a1-m1-cA 233 31 0.8710 0.1159 0.8710 2.04e-12 3q01-a1-m1-cA_3q01-a1-m1-cB
16 1a1u-a1-m1-cC 29 29 0.7742 0.8276 0.8276 3.97e-10 1a1u-a1-m1-cA_1a1u-a1-m1-cC
17 1a1u-a1-m1-cA 29 29 0.7742 0.8276 0.8276 3.97e-10 1a1u-a1-m1-cA_1a1u-a1-m1-cC
18 4cz6-a1-m1-cB 29 28 0.4839 0.5172 0.5357 2.91e-06 4cz6-a1-m1-cC_4cz6-a1-m1-cB
19 4d1l-a2-m2-cB 37 28 0.4839 0.4054 0.5357 3.00e-06 4d1l-a2-m2-cB_4d1l-a2-m1-cA, 4d1l-a2-m2-cB_4d1l-a2-m2-cA
20 4d1l-a2-m2-cA 38 28 0.4839 0.3947 0.5357 3.26e-06 4d1l-a2-m2-cB_4d1l-a2-m2-cA
21 4d1l-a2-m1-cA 38 28 0.4839 0.3947 0.5357 3.26e-06 4d1l-a2-m2-cB_4d1l-a2-m1-cA
22 4cz6-a1-m1-cC 27 27 0.4839 0.5556 0.5556 5.49e-06 4cz6-a1-m1-cC_4cz6-a1-m1-cB
23 2nb1-a1-m1-cC 60 25 0.4194 0.2167 0.5200 0.001 2nb1-a1-m1-cA_2nb1-a1-m1-cC
24 2nb1-a1-m1-cA 60 25 0.4194 0.2167 0.5200 0.001 2nb1-a1-m1-cA_2nb1-a1-m1-cC
25 2wqj-a5-m1-cZ 31 23 0.3871 0.3871 0.5217 0.003 2wqj-a5-m1-c1_2wqj-a5-m1-cZ, 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
26 2wqj-a5-m1-c1 26 25 0.3871 0.4615 0.4800 0.004 2wqj-a5-m1-c1_2wqj-a5-m1-cZ
27 2wqj-a1-m1-cL 26 25 0.3871 0.4615 0.4800 0.004 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
28 2wqj-a5-m1-c2 27 23 0.3871 0.4444 0.5217 0.004 2wqj-a5-m1-c2_2wqj-a5-m1-cZ
29 2wqj-a4-m1-cO 27 23 0.3871 0.4444 0.5217 0.004 2wqj-a4-m1-cO_2wqj-a4-m1-cP
30 2wqj-a1-m1-cJ 27 23 0.3871 0.4444 0.5217 0.004 2wqj-a1-m1-cL_2wqj-a1-m1-cJ
31 2wqj-a4-m1-cP 28 23 0.3871 0.4286 0.5217 0.004 2wqj-a4-m1-cO_2wqj-a4-m1-cP
32 4a9z-a1-m1-cB 45 25 0.3871 0.2667 0.4800 0.005 4a9z-a1-m1-cB_4a9z-a1-m1-cC
33 7z73-a1-m1-cD 43 25 0.3871 0.2791 0.4800 0.005 7z73-a1-m1-cD_7z73-a1-m1-cC
34 7z73-a1-m1-cC 44 25 0.3871 0.2727 0.4800 0.005 7z73-a1-m1-cD_7z73-a1-m1-cC
35 4a9z-a1-m1-cC 58 25 0.3871 0.2069 0.4800 0.005 4a9z-a1-m1-cB_4a9z-a1-m1-cC
36 3zy1-a1-m4-cA 40 25 0.3871 0.3000 0.4800 0.005 3zy1-a1-m1-cA_3zy1-a1-m4-cA, 3zy1-a1-m2-cA_3zy1-a1-m4-cA
37 3zy1-a1-m2-cA 40 25 0.3871 0.3000 0.4800 0.005 3zy1-a1-m2-cA_3zy1-a1-m4-cA
38 3zy1-a1-m1-cA 40 25 0.3871 0.3000 0.4800 0.005 3zy1-a1-m1-cA_3zy1-a1-m4-cA
39 2nb1-a1-m1-cD 50 23 0.3548 0.2200 0.4783 0.010 2nb1-a1-m1-cB_2nb1-a1-m1-cD
40 2nb1-a1-m1-cB 50 23 0.3548 0.2200 0.4783 0.010 2nb1-a1-m1-cB_2nb1-a1-m1-cD
41 5hob-a1-m1-cB 45 23 0.3548 0.2444 0.4783 0.017 5hob-a1-m1-cB_5hob-a1-m1-cC
42 5hob-a1-m1-cC 46 23 0.3548 0.2391 0.4783 0.019 5hob-a1-m1-cB_5hob-a1-m1-cC
43 2wtt-a2-m1-cB 41 24 0.3871 0.2927 0.5000 0.038 2wtt-a2-m1-cA_2wtt-a2-m1-cB
44 2wtt-a2-m1-cA 40 24 0.3871 0.3000 0.5000 0.039 2wtt-a2-m1-cA_2wtt-a2-m1-cB
45 2wtt-a4-m1-cO 39 23 0.3871 0.3077 0.5217 0.039 2wtt-a4-m1-cM_2wtt-a4-m1-cO
46 2mw4-a1-m1-cD 47 25 0.3871 0.2553 0.4800 0.043 2mw4-a1-m1-cA_2mw4-a1-m1-cD, 2mw4-a1-m1-cB_2mw4-a1-m1-cD, 2mw4-a1-m1-cC_2mw4-a1-m1-cD
47 2mw4-a1-m1-cC 47 25 0.3871 0.2553 0.4800 0.043 2mw4-a1-m1-cC_2mw4-a1-m1-cD
48 2mw4-a1-m1-cB 47 25 0.3871 0.2553 0.4800 0.043 2mw4-a1-m1-cB_2mw4-a1-m1-cD
49 2mw4-a1-m1-cA 47 25 0.3871 0.2553 0.4800 0.043 2mw4-a1-m1-cA_2mw4-a1-m1-cD
50 2wtt-a4-m1-cM 27 23 0.3871 0.4444 0.5217 0.071 2wtt-a4-m1-cM_2wtt-a4-m1-cO
51 3vp6-a1-m1-cA 499 15 0.2903 0.0180 0.6000 1.4 3vp6-a1-m1-cB_3vp6-a1-m1-cA
52 3vp6-a1-m1-cB 490 15 0.2903 0.0184 0.6000 1.4 3vp6-a1-m1-cB_3vp6-a1-m1-cA
53 4u7n-a1-m1-cB 212 28 0.3548 0.0519 0.3929 7.7 4u7n-a1-m1-cA_4u7n-a1-m1-cB
54 4u7n-a1-m1-cA 211 28 0.3548 0.0521 0.3929 7.8 4u7n-a1-m1-cA_4u7n-a1-m1-cB
55 4u7o-a1-m1-cA 234 28 0.3548 0.0470 0.3929 9.0 4u7o-a1-m1-cB_4u7o-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600