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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNEQNLSLAD
VTQQAGLVKSELEAQTGLQILQTGVGQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3np5-a1-m1-cD 89 87 1.0000 0.9775 1.0000 6.47e-59 3np5-a1-m1-cB_3np5-a1-m1-cD, 3np5-a1-m1-cC_3np5-a1-m1-cD
2 3np5-a1-m1-cB 89 87 1.0000 0.9775 1.0000 6.47e-59 3np5-a1-m1-cB_3np5-a1-m1-cD, 3np5-a1-m1-cC_3np5-a1-m1-cB
3 3np5-a1-m1-cC 88 87 1.0000 0.9886 1.0000 7.24e-59 3np5-a1-m1-cC_3np5-a1-m1-cB, 3np5-a1-m1-cC_3np5-a1-m1-cD
4 3n01-a2-m2-cA 87 87 1.0000 1.0000 1.0000 7.84e-59 3n01-a2-m1-cB_3n01-a2-m2-cA
5 3n01-a1-m1-cA 87 87 1.0000 1.0000 1.0000 7.84e-59 3n01-a1-m1-cB_3n01-a1-m1-cA
6 3n01-a2-m1-cB 84 87 0.9655 1.0000 0.9655 3.03e-54 3n01-a2-m1-cB_3n01-a2-m2-cA
7 3n01-a1-m1-cB 84 87 0.9655 1.0000 0.9655 3.03e-54 3n01-a1-m1-cB_3n01-a1-m1-cA
8 5mz4-a1-m1-cB 679 37 0.1379 0.0177 0.3243 2.3 5mz4-a1-m1-cB_5mz4-a1-m1-cA
9 1fxz-a1-m1-cC 371 34 0.1609 0.0377 0.4118 3.5 1fxz-a1-m1-cB_1fxz-a1-m1-cC
10 1fxz-a1-m1-cB 371 34 0.1609 0.0377 0.4118 3.5 1fxz-a1-m1-cB_1fxz-a1-m1-cC
11 4kc0-a1-m1-cB 178 69 0.2414 0.1180 0.3043 3.7 4kc0-a1-m1-cB_4kc0-a1-m1-cA
12 4lok-a1-m1-cB 180 69 0.2414 0.1167 0.3043 3.9 4lok-a1-m1-cB_4lok-a1-m1-cA
13 4kc0-a1-m1-cA 182 69 0.2414 0.1154 0.3043 4.0 4kc0-a1-m1-cB_4kc0-a1-m1-cA
14 3k1j-a1-m3-cA 566 50 0.1609 0.0247 0.2800 4.0 3k1j-a1-m3-cB_3k1j-a1-m3-cA
15 4lok-a1-m1-cA 181 69 0.2414 0.1160 0.3043 4.0 4lok-a1-m1-cB_4lok-a1-m1-cA
16 3k1j-a1-m3-cB 561 50 0.1609 0.0250 0.2800 4.1 3k1j-a1-m3-cB_3k1j-a1-m3-cA
17 1to6-a2-m2-cB 371 64 0.2529 0.0593 0.3438 9.4 1to6-a2-m1-cA_1to6-a2-m2-cB, 1to6-a2-m2-cA_1to6-a2-m2-cB
18 1to6-a2-m2-cA 371 64 0.2529 0.0593 0.3438 9.4 1to6-a2-m2-cA_1to6-a2-m2-cB
19 1to6-a2-m1-cA 371 64 0.2529 0.0593 0.3438 9.4 1to6-a2-m1-cA_1to6-a2-m2-cB

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Reference:
Jacob Schwartz et al.

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