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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
EYGYIVTDQKPLSLAAGVKLLEILAEHVHMSSGSFINISVVGPALTFRIRHNLSLADVTQ
QAGLVKSELEAQTGLQILQTGVGQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3n01-a2-m1-cB 84 84 1.0000 1.0000 1.0000 1.75e-56 3n01-a2-m1-cB_3n01-a2-m2-cA
2 3n01-a1-m1-cB 84 84 1.0000 1.0000 1.0000 1.75e-56 3n01-a1-m1-cB_3n01-a1-m1-cA
3 3np5-a1-m1-cC 88 87 1.0000 0.9545 0.9655 2.67e-54 3np5-a1-m1-cC_3np5-a1-m1-cB, 3np5-a1-m1-cC_3np5-a1-m1-cD
4 3n01-a2-m2-cA 87 87 1.0000 0.9655 0.9655 2.92e-54 3n01-a2-m1-cB_3n01-a2-m2-cA
5 3n01-a1-m1-cA 87 87 1.0000 0.9655 0.9655 2.92e-54 3n01-a1-m1-cB_3n01-a1-m1-cA
6 3np5-a1-m1-cD 89 87 1.0000 0.9438 0.9655 3.04e-54 3np5-a1-m1-cB_3np5-a1-m1-cD, 3np5-a1-m1-cC_3np5-a1-m1-cD
7 3np5-a1-m1-cB 89 87 1.0000 0.9438 0.9655 3.04e-54 3np5-a1-m1-cB_3np5-a1-m1-cD, 3np5-a1-m1-cC_3np5-a1-m1-cB
8 5mz4-a1-m1-cB 679 37 0.1429 0.0177 0.3243 2.1 5mz4-a1-m1-cB_5mz4-a1-m1-cA
9 3k1j-a1-m3-cA 566 50 0.1667 0.0247 0.2800 3.7 3k1j-a1-m3-cB_3k1j-a1-m3-cA
10 3k1j-a1-m3-cB 561 50 0.1667 0.0250 0.2800 3.8 3k1j-a1-m3-cB_3k1j-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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