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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
FAAAVSAFAANMLSSVLKSEATSSIIKSVGETAVGAAQSGLAKLPGLLMSVPGKIAARVR
ARRARRRAARAN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3s6p-a1-m9-cG 72 72 1.0000 1.0000 1.0000 5.17e-43 3s6p-a1-m54-cH_3s6p-a1-m9-cG, 3s6p-a1-m8-cH_3s6p-a1-m9-cG
2 3s6p-a1-m24-cG 72 72 1.0000 1.0000 1.0000 5.17e-43 3s6p-a1-m9-cH_3s6p-a1-m24-cG
3 3s6p-a1-m10-cG 72 72 1.0000 1.0000 1.0000 5.17e-43 3s6p-a1-m9-cH_3s6p-a1-m10-cG
4 3s6p-a1-m9-cH 63 45 0.5000 0.5714 0.8000 8.96e-16 3s6p-a1-m9-cH_3s6p-a1-m10-cG, 3s6p-a1-m9-cH_3s6p-a1-m24-cG
5 3s6p-a1-m8-cH 63 45 0.5000 0.5714 0.8000 8.96e-16 3s6p-a1-m8-cH_3s6p-a1-m9-cG
6 3s6p-a1-m54-cH 63 45 0.5000 0.5714 0.8000 8.96e-16 3s6p-a1-m54-cH_3s6p-a1-m9-cG
7 2qqp-a1-m9-cF 67 68 0.3889 0.4179 0.4118 5.00e-05 2qqp-a1-m55-cF_2qqp-a1-m9-cF, 2qqp-a1-m8-cD_2qqp-a1-m9-cF
8 2qqp-a1-m55-cF 67 68 0.3889 0.4179 0.4118 5.00e-05 2qqp-a1-m55-cF_2qqp-a1-m9-cF
9 2qqp-a1-m8-cD 40 38 0.2639 0.4750 0.5000 0.003 2qqp-a1-m8-cD_2qqp-a1-m9-cF

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Reference:
Jacob Schwartz et al.

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