Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
FAAAVSAFAANMLSSVLKSEATSSIIKSVGETAVGPGLLMSVPGKIAARVRARRARRRAA
RAN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3s6p-a1-m9-cH 63 63 1.0000 1.0000 1.0000 7.69e-37 3s6p-a1-m9-cH_3s6p-a1-m10-cG, 3s6p-a1-m9-cH_3s6p-a1-m24-cG
2 3s6p-a1-m8-cH 63 63 1.0000 1.0000 1.0000 7.69e-37 3s6p-a1-m8-cH_3s6p-a1-m9-cG
3 3s6p-a1-m54-cH 63 63 1.0000 1.0000 1.0000 7.69e-37 3s6p-a1-m54-cH_3s6p-a1-m9-cG
4 3s6p-a1-m9-cG 72 45 0.5714 0.5000 0.8000 5.64e-16 3s6p-a1-m54-cH_3s6p-a1-m9-cG, 3s6p-a1-m8-cH_3s6p-a1-m9-cG
5 3s6p-a1-m24-cG 72 45 0.5714 0.5000 0.8000 5.64e-16 3s6p-a1-m9-cH_3s6p-a1-m24-cG
6 3s6p-a1-m10-cG 72 45 0.5714 0.5000 0.8000 5.64e-16 3s6p-a1-m9-cH_3s6p-a1-m10-cG
7 2qqp-a1-m9-cF 67 67 0.4127 0.3881 0.3881 5.33e-04 2qqp-a1-m55-cF_2qqp-a1-m9-cF, 2qqp-a1-m8-cD_2qqp-a1-m9-cF
8 2qqp-a1-m55-cF 67 67 0.4127 0.3881 0.3881 5.33e-04 2qqp-a1-m55-cF_2qqp-a1-m9-cF
9 2qqp-a1-m8-cD 40 35 0.2698 0.4250 0.4857 0.034 2qqp-a1-m8-cD_2qqp-a1-m9-cF
10 6c0d-a1-m2-cA 404 54 0.2540 0.0396 0.2963 4.3 6c0d-a1-m1-cA_6c0d-a1-m2-cA
11 6c0d-a1-m1-cA 404 54 0.2540 0.0396 0.2963 4.3 6c0d-a1-m1-cA_6c0d-a1-m2-cA
12 1d7f-a1-m1-cB 686 27 0.1429 0.0131 0.3333 6.7 1d7f-a1-m1-cA_1d7f-a1-m1-cB
13 1d7f-a1-m1-cA 686 27 0.1429 0.0131 0.3333 6.7 1d7f-a1-m1-cA_1d7f-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600