Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=67)
FAGTVSALASIGLGLLGKSSATPSVIKGIAQQAVGAVQANPGILEGAVKAIGSVGARLVG
SIKARRA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2qqp-a1-m9-cF 67 67 1.0000 1.0000 1.0000 1.19e-38 2qqp-a1-m55-cF_2qqp-a1-m9-cF, 2qqp-a1-m8-cD_2qqp-a1-m9-cF
2 2qqp-a1-m55-cF 67 67 1.0000 1.0000 1.0000 1.19e-38 2qqp-a1-m55-cF_2qqp-a1-m9-cF
3 2qqp-a1-m8-cD 40 40 0.5970 1.0000 1.0000 5.25e-20 2qqp-a1-m8-cD_2qqp-a1-m9-cF
4 4gu0-a2-m1-cD 735 28 0.1940 0.0177 0.4643 0.22 4gu0-a2-m1-cD_4gu0-a2-m1-cB
5 4fwj-a3-m1-cB 742 28 0.1940 0.0175 0.4643 0.22 4fwj-a3-m1-cB_4fwj-a3-m1-cA
6 4gu1-a3-m1-cB 746 28 0.1940 0.0174 0.4643 0.22 4gu1-a3-m1-cA_4gu1-a3-m1-cB
7 4gu1-a3-m1-cA 746 28 0.1940 0.0174 0.4643 0.22 4gu1-a3-m1-cA_4gu1-a3-m1-cB
8 4gu0-a2-m1-cB 748 28 0.1940 0.0174 0.4643 0.22 4gu0-a2-m1-cD_4gu0-a2-m1-cB
9 4fwj-a3-m1-cA 750 28 0.1940 0.0173 0.4643 0.22 4fwj-a3-m1-cB_4fwj-a3-m1-cA
10 3s6p-a1-m9-cG 72 31 0.2239 0.2083 0.4839 0.71 3s6p-a1-m54-cH_3s6p-a1-m9-cG, 3s6p-a1-m8-cH_3s6p-a1-m9-cG
11 3s6p-a1-m24-cG 72 31 0.2239 0.2083 0.4839 0.71 3s6p-a1-m9-cH_3s6p-a1-m24-cG
12 3s6p-a1-m10-cG 72 31 0.2239 0.2083 0.4839 0.71 3s6p-a1-m9-cH_3s6p-a1-m10-cG
13 7odc-a1-m2-cA 387 55 0.2388 0.0413 0.2909 1.4 7odc-a1-m1-cA_7odc-a1-m2-cA
14 7odc-a1-m1-cA 387 55 0.2388 0.0413 0.2909 1.4 7odc-a1-m1-cA_7odc-a1-m2-cA
15 1vkm-a3-m1-cF 282 51 0.2388 0.0567 0.3137 1.4 1vkm-a3-m1-cB_1vkm-a3-m1-cF, 1vkm-a3-m1-cE_1vkm-a3-m1-cF
16 1vkm-a3-m1-cE 282 51 0.2388 0.0567 0.3137 1.4 1vkm-a3-m1-cC_1vkm-a3-m1-cE, 1vkm-a3-m1-cE_1vkm-a3-m1-cF
17 1vkm-a3-m1-cC 282 51 0.2388 0.0567 0.3137 1.4 1vkm-a3-m1-cC_1vkm-a3-m1-cE
18 1vkm-a3-m1-cB 282 51 0.2388 0.0567 0.3137 1.4 1vkm-a3-m1-cB_1vkm-a3-m1-cF
19 6juy-a1-m1-cD 623 49 0.2537 0.0273 0.3469 2.1 6juy-a1-m1-cD_6juy-a1-m1-cA, 6juy-a1-m1-cD_6juy-a1-m1-cB, 6juy-a1-m1-cD_6juy-a1-m1-cC
20 2uvn-a1-m2-cA 399 31 0.1940 0.0326 0.4194 5.7 2uvn-a1-m2-cB_2uvn-a1-m2-cA
21 2uvn-a1-m1-cA 399 31 0.1940 0.0326 0.4194 5.7 2uvn-a1-m2-cB_2uvn-a1-m1-cA
22 2rhs-a1-m1-cD 785 37 0.1940 0.0166 0.3514 7.7 2rhs-a1-m1-cD_2rhs-a1-m1-cB
23 2rhs-a1-m1-cB 786 37 0.1940 0.0165 0.3514 7.9 2rhs-a1-m1-cD_2rhs-a1-m1-cB
24 3s6p-a1-m9-cH 63 27 0.1940 0.2063 0.4815 9.4 3s6p-a1-m9-cH_3s6p-a1-m10-cG, 3s6p-a1-m9-cH_3s6p-a1-m24-cG
25 3s6p-a1-m8-cH 63 27 0.1940 0.2063 0.4815 9.4 3s6p-a1-m8-cH_3s6p-a1-m9-cG
26 3s6p-a1-m54-cH 63 27 0.1940 0.2063 0.4815 9.4 3s6p-a1-m54-cH_3s6p-a1-m9-cG

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600