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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=74)
FDLMIKENPSSQYWKEVAEKRRKALYEALKENEKLHKEIEQKDNEIARLKKENKELAEVA
EHVQYMAELIERLN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2wvr-a1-m2-cB 74 74 1.0000 1.0000 1.0000 5.92e-47 2wvr-a1-m2-cA_2wvr-a1-m2-cB
2 2wvr-a1-m2-cA 70 69 0.9324 0.9857 1.0000 2.07e-42 2wvr-a1-m2-cA_2wvr-a1-m2-cB
3 2zxx-a2-m1-cE 77 74 0.8784 0.8442 0.8784 7.79e-40 2zxx-a2-m1-cD_2zxx-a2-m1-cE
4 2zxx-a2-m1-cD 64 64 0.7703 0.8906 0.8906 1.53e-32 2zxx-a2-m1-cD_2zxx-a2-m1-cE
5 6gir-a1-m2-cA 406 51 0.2432 0.0443 0.3529 0.84 6gir-a1-m1-cA_6gir-a1-m2-cA
6 6gir-a1-m1-cA 406 51 0.2432 0.0443 0.3529 0.84 6gir-a1-m1-cA_6gir-a1-m2-cA
7 2dq3-a1-m1-cB 422 54 0.2568 0.0450 0.3519 0.87 2dq3-a1-m1-cA_2dq3-a1-m1-cB
8 2dq3-a1-m1-cA 422 54 0.2568 0.0450 0.3519 0.87 2dq3-a1-m1-cA_2dq3-a1-m1-cB
9 5j10-a1-m1-cB 70 48 0.2838 0.3000 0.4375 4.9 5j10-a1-m1-cA_5j10-a1-m1-cB
10 5j10-a1-m1-cA 70 48 0.2838 0.3000 0.4375 4.9 5j10-a1-m1-cA_5j10-a1-m1-cB
11 1deb-a5-m3-cA 54 39 0.2027 0.2778 0.3846 5.3 1deb-a5-m1-cA_1deb-a5-m3-cA
12 1deb-a5-m1-cA 54 39 0.2027 0.2778 0.3846 5.3 1deb-a5-m1-cA_1deb-a5-m3-cA
13 1deb-a4-m1-cA 54 39 0.2027 0.2778 0.3846 5.3 1deb-a4-m1-cB_1deb-a4-m1-cA
14 1deb-a3-m1-cA 54 39 0.2027 0.2778 0.3846 5.3 1deb-a3-m2-cB_1deb-a3-m1-cA
15 1deb-a4-m1-cB 53 39 0.2027 0.2830 0.3846 5.3 1deb-a4-m1-cB_1deb-a4-m1-cA
16 1deb-a3-m2-cB 53 39 0.2027 0.2830 0.3846 5.3 1deb-a3-m1-cB_1deb-a3-m2-cB, 1deb-a3-m2-cB_1deb-a3-m1-cA
17 1deb-a3-m1-cB 53 39 0.2027 0.2830 0.3846 5.3 1deb-a3-m1-cB_1deb-a3-m2-cB
18 3thf-a2-m2-cA 175 35 0.1757 0.0743 0.3714 5.3 3thf-a2-m2-cB_3thf-a2-m2-cA
19 3thf-a2-m1-cA 175 35 0.1757 0.0743 0.3714 5.3 3thf-a2-m2-cB_3thf-a2-m1-cA
20 3thf-a2-m2-cB 174 35 0.1757 0.0747 0.3714 5.8 3thf-a2-m2-cB_3thf-a2-m1-cA, 3thf-a2-m2-cB_3thf-a2-m2-cA
21 5iea-a1-m1-cD 118 58 0.2838 0.1780 0.3621 7.7 5iea-a1-m1-cB_5iea-a1-m1-cD
22 5iea-a1-m1-cB 118 58 0.2838 0.1780 0.3621 7.7 5iea-a1-m1-cB_5iea-a1-m1-cD
23 2j5u-a1-m9-cB 201 21 0.1622 0.0597 0.5714 8.0 2j5u-a1-m10-cB_2j5u-a1-m9-cB, 2j5u-a1-m6-cB_2j5u-a1-m9-cB, 2j5u-a1-m9-cB_2j5u-a1-m9-cA
24 2j5u-a1-m6-cB 201 21 0.1622 0.0597 0.5714 8.0 2j5u-a1-m6-cB_2j5u-a1-m9-cB
25 2j5u-a1-m10-cB 201 21 0.1622 0.0597 0.5714 8.0 2j5u-a1-m10-cB_2j5u-a1-m9-cB
26 2j5u-a1-m9-cA 210 21 0.1622 0.0571 0.5714 8.6 2j5u-a1-m9-cB_2j5u-a1-m9-cA

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Reference:
Jacob Schwartz et al.

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