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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
FELRPVIGLTRGLSSADIETLTANAIRLHRQLLEKADQLFQVLPDDIKIGTAAGGEQHLE
YIEAMIEMHAQMSAVNTLVGLLGFIPKVSV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2hjd-a2-m1-cD 90 90 1.0000 1.0000 1.0000 8.73e-62 2hjd-a2-m1-cC_2hjd-a2-m1-cD
2 2hjd-a2-m1-cC 89 89 0.9889 1.0000 1.0000 3.53e-61 2hjd-a2-m1-cC_2hjd-a2-m1-cD
3 1rfy-a2-m3-cB 88 87 0.6667 0.6818 0.6897 2.83e-41 1rfy-a2-m1-cB_1rfy-a2-m3-cB
4 1rfy-a2-m1-cB 88 87 0.6667 0.6818 0.6897 2.83e-41 1rfy-a2-m1-cB_1rfy-a2-m3-cB
5 1kn1-a1-m6-cA 160 39 0.1889 0.1062 0.4359 0.20 1kn1-a1-m1-cA_1kn1-a1-m6-cA, 1kn1-a1-m2-cA_1kn1-a1-m6-cA
6 1kn1-a1-m2-cA 160 39 0.1889 0.1062 0.4359 0.20 1kn1-a1-m2-cA_1kn1-a1-m6-cA
7 1kn1-a1-m1-cA 160 39 0.1889 0.1062 0.4359 0.20 1kn1-a1-m1-cA_1kn1-a1-m6-cA
8 1ml4-a3-m5-cA 307 33 0.1889 0.0554 0.5152 0.31 1ml4-a3-m4-cA_1ml4-a3-m5-cA
9 1ml4-a3-m4-cA 307 33 0.1889 0.0554 0.5152 0.31 1ml4-a3-m4-cA_1ml4-a3-m5-cA
10 2vjt-a1-m6-cA 160 39 0.1778 0.1000 0.4103 0.93 2vjt-a1-m4-cA_2vjt-a1-m6-cA, 2vjt-a1-m5-cA_2vjt-a1-m6-cA
11 2vjt-a1-m5-cA 160 39 0.1778 0.1000 0.4103 0.93 2vjt-a1-m5-cA_2vjt-a1-m6-cA
12 2vjt-a1-m4-cA 160 39 0.1778 0.1000 0.4103 0.93 2vjt-a1-m4-cA_2vjt-a1-m6-cA
13 1ai9-a1-m1-cB 192 59 0.1667 0.0781 0.2542 1.4 1ai9-a1-m1-cA_1ai9-a1-m1-cB
14 1ai9-a1-m1-cA 192 59 0.1667 0.0781 0.2542 1.4 1ai9-a1-m1-cA_1ai9-a1-m1-cB
15 7eyd-a1-m1-cy9 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cb9_7eyd-a1-m1-cy9
16 7eyd-a1-m1-cu9 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cO8_7eyd-a1-m1-cu9
17 7eyd-a1-m1-ct8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cC8_7eyd-a1-m1-ct8
18 7eyd-a1-m1-cr8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cV8_7eyd-a1-m1-cr8
19 7eyd-a1-m1-cg8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cX9_7eyd-a1-m1-cg8
20 7eyd-a1-m1-cf9 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cE8_7eyd-a1-m1-cf9
21 7eyd-a1-m1-cb9 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cb9_7eyd-a1-m1-cy9
22 7eyd-a1-m1-cX9 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cX9_7eyd-a1-m1-cg8
23 7eyd-a1-m1-cV8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cV8_7eyd-a1-m1-cr8
24 7eyd-a1-m1-cO8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cO8_7eyd-a1-m1-cu9
25 7eyd-a1-m1-cE8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cE8_7eyd-a1-m1-cf9
26 7eyd-a1-m1-cC8 159 39 0.1778 0.1006 0.4103 2.7 7eyd-a1-m1-cC8_7eyd-a1-m1-ct8
27 7bjt-a1-m1-cB 727 58 0.2222 0.0275 0.3448 4.7 7bjt-a1-m1-cA_7bjt-a1-m1-cB
28 7bjt-a1-m1-cA 727 58 0.2222 0.0275 0.3448 4.7 7bjt-a1-m1-cA_7bjt-a1-m1-cB
29 6yx7-a1-m1-cKKK 160 39 0.1667 0.0938 0.3846 6.2 6yx7-a1-m1-cCCC_6yx7-a1-m1-cKKK
30 6yx7-a1-m1-cIII 160 39 0.1667 0.0938 0.3846 6.2 6yx7-a1-m1-cAAA_6yx7-a1-m1-cIII
31 6yx7-a1-m1-cCCC 160 39 0.1667 0.0938 0.3846 6.2 6yx7-a1-m1-cCCC_6yx7-a1-m1-cKKK
32 6yx7-a1-m1-cAAA 160 39 0.1667 0.0938 0.3846 6.2 6yx7-a1-m1-cAAA_6yx7-a1-m1-cIII
33 1rnl-a3-m2-cA 200 36 0.1444 0.0650 0.3611 6.3 1rnl-a3-m1-cA_1rnl-a3-m2-cA
34 1rnl-a3-m1-cA 200 36 0.1444 0.0650 0.3611 6.3 1rnl-a3-m1-cA_1rnl-a3-m2-cA
35 1rnl-a2-m4-cA 200 36 0.1444 0.0650 0.3611 6.3 1rnl-a2-m2-cA_1rnl-a2-m4-cA
36 1rnl-a2-m2-cA 200 36 0.1444 0.0650 0.3611 6.3 1rnl-a2-m2-cA_1rnl-a2-m4-cA
37 7cm9-a2-m1-cC 693 41 0.1222 0.0159 0.2683 9.3 7cm9-a2-m1-cD_7cm9-a2-m1-cC
38 7cm9-a2-m1-cD 692 41 0.1222 0.0159 0.2683 9.3 7cm9-a2-m1-cD_7cm9-a2-m1-cC

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Reference:
Jacob Schwartz et al.

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