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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=27)
FFRKSKEKIGKEFKRIVQRIKDFLRNL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5nnm-a1-m1-cB 32 27 1.0000 0.8438 1.0000 5.06e-12 5nnm-a1-m1-cB_5nnm-a1-m1-cA
2 5nnm-a1-m1-cA 34 27 1.0000 0.7941 1.0000 5.38e-12 5nnm-a1-m1-cB_5nnm-a1-m1-cA
3 5nnk-a1-m2-cA 34 27 1.0000 0.7941 1.0000 5.38e-12 5nnk-a1-m1-cA_5nnk-a1-m2-cA
4 5nnk-a1-m1-cA 34 27 1.0000 0.7941 1.0000 5.38e-12 5nnk-a1-m1-cA_5nnk-a1-m2-cA
5 7pdc-a1-m2-cB 27 27 1.0000 1.0000 1.0000 5.49e-12 7pdc-a1-m2-cB_7pdc-a1-m2-cA
6 7pdc-a1-m2-cA 30 27 1.0000 0.9000 1.0000 5.93e-12 7pdc-a1-m2-cB_7pdc-a1-m2-cA
7 7npq-a1-m1-cB 13 13 0.4444 0.9231 0.9231 0.13 7npq-a1-m1-cA_7npq-a1-m1-cB
8 7npq-a1-m1-cA 13 13 0.4444 0.9231 0.9231 0.13 7npq-a1-m1-cA_7npq-a1-m1-cB
9 7qpg-a1-m1-cS 2208 25 0.3333 0.0041 0.3600 2.7 7qpg-a1-m1-cR_7qpg-a1-m1-cS
10 7qpg-a1-m1-cR 2208 25 0.3333 0.0041 0.3600 2.7 7qpg-a1-m1-cR_7qpg-a1-m1-cS

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Reference:
Jacob Schwartz et al.

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