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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
FFSDFGLMWYLEELKKEEFRKFKEHLKQMTLQLELKQIPWTEVKKASREELANLLIKHYE
EQQAWNITLRIFQKMDRKDLCMKVMRERTGY

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ewi-a3-m2-cA 91 91 1.0000 1.0000 1.0000 7.19e-63 4ewi-a3-m1-cA_4ewi-a3-m2-cA, 4ewi-a3-m2-cB_4ewi-a3-m2-cA
2 4ewi-a3-m1-cA 91 91 1.0000 1.0000 1.0000 7.19e-63 4ewi-a3-m1-cA_4ewi-a3-m2-cA, 4ewi-a3-m2-cB_4ewi-a3-m1-cA
3 4ewi-a3-m2-cB 90 90 0.9890 1.0000 1.0000 6.34e-62 4ewi-a3-m2-cB_4ewi-a3-m1-cA, 4ewi-a3-m2-cB_4ewi-a3-m2-cA
4 4n1k-a3-m1-cA 88 81 0.4945 0.5114 0.5556 9.19e-25 4n1k-a3-m1-cA_4n1k-a3-m2-cD, 4n1k-a3-m2-cC_4n1k-a3-m1-cA
5 4n1k-a3-m2-cC 86 81 0.4945 0.5233 0.5556 1.11e-24 4n1k-a3-m2-cC_4n1k-a3-m1-cA
6 4n1k-a3-m2-cD 94 87 0.5055 0.4894 0.5287 1.26e-24 4n1k-a3-m1-cA_4n1k-a3-m2-cD
7 4n1j-a3-m2-cC 86 87 0.4945 0.5233 0.5172 3.16e-20 4n1j-a3-m2-cC_4n1j-a3-m2-cD
8 4n1j-a3-m2-cD 91 87 0.4945 0.4945 0.5172 3.57e-20 4n1j-a3-m2-cC_4n1j-a3-m2-cD
9 2n1f-a1-m1-cO 89 71 0.1978 0.2022 0.2535 0.044 2n1f-a1-m1-cH_2n1f-a1-m1-cO, 2n1f-a1-m1-cI_2n1f-a1-m1-cO
10 2n1f-a1-m1-cI 89 71 0.1978 0.2022 0.2535 0.044 2n1f-a1-m1-cI_2n1f-a1-m1-cO
11 2n1f-a1-m1-cH 89 71 0.1978 0.2022 0.2535 0.044 2n1f-a1-m1-cH_2n1f-a1-m1-cO
12 2n1f-a1-m1-cE 89 71 0.1978 0.2022 0.2535 0.044 2n1f-a1-m1-cD_2n1f-a1-m1-cE
13 2n1f-a1-m1-cD 89 71 0.1978 0.2022 0.2535 0.044 2n1f-a1-m1-cD_2n1f-a1-m1-cE
14 7k3r-a1-m1-cU 95 70 0.2198 0.2105 0.2857 0.47 7k3r-a1-m1-cG_7k3r-a1-m1-cU, 7k3r-a1-m1-cM_7k3r-a1-m1-cU, 7k3r-a1-m1-cO_7k3r-a1-m1-cU
15 7k3r-a1-m1-cO 95 70 0.2198 0.2105 0.2857 0.47 7k3r-a1-m1-cO_7k3r-a1-m1-cU
16 7k3r-a1-m1-cM 95 70 0.2198 0.2105 0.2857 0.47 7k3r-a1-m1-cM_7k3r-a1-m1-cU
17 7k3r-a1-m1-cG 95 70 0.2198 0.2105 0.2857 0.47 7k3r-a1-m1-cG_7k3r-a1-m1-cU
18 7mwz-a2-m1-cC 349 27 0.1209 0.0315 0.4074 5.5 7mwz-a2-m1-cD_7mwz-a2-m1-cC
19 6h5l-a1-m6-cA 506 51 0.1758 0.0316 0.3137 5.8 6h5l-a1-m5-cA_6h5l-a1-m6-cA
20 6h5l-a1-m5-cA 506 51 0.1758 0.0316 0.3137 5.8 6h5l-a1-m5-cA_6h5l-a1-m6-cA
21 7mwz-a2-m1-cD 301 27 0.1209 0.0365 0.4074 6.6 7mwz-a2-m1-cD_7mwz-a2-m1-cC
22 4e51-a1-m1-cB 397 53 0.1429 0.0327 0.2453 9.6 4e51-a1-m1-cB_4e51-a1-m1-cA
23 1o22-a1-m2-cA 146 29 0.1209 0.0753 0.3793 9.7 1o22-a1-m1-cA_1o22-a1-m2-cA
24 1o22-a1-m1-cA 146 29 0.1209 0.0753 0.3793 9.7 1o22-a1-m1-cA_1o22-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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