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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
FGEGKVVAAAYPDLYDIIVKLNDTVFTGKTLDYKTQKLIAIGIVASRCDEVAIEKQKSAK
ELGITKEEIADVLRVVLLTSGPAFTKAKILEKL

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3d7i-a1-m2-cB 93 93 1.0000 1.0000 1.0000 9.41e-62 3d7i-a1-m1-cA_3d7i-a1-m2-cB, 3d7i-a1-m2-cC_3d7i-a1-m2-cB
2 3d7i-a1-m2-cA 92 92 0.9892 1.0000 1.0000 1.08e-60 3d7i-a1-m2-cC_3d7i-a1-m2-cA
3 3d7i-a1-m1-cA 92 92 0.9892 1.0000 1.0000 1.08e-60 3d7i-a1-m1-cA_3d7i-a1-m2-cB, 3d7i-a1-m2-cC_3d7i-a1-m1-cA
4 3d7i-a1-m2-cC 91 91 0.9785 1.0000 1.0000 7.80e-60 3d7i-a1-m2-cC_3d7i-a1-m1-cA, 3d7i-a1-m2-cC_3d7i-a1-m2-cA, 3d7i-a1-m2-cC_3d7i-a1-m2-cB
5 2cwq-a1-m2-cC 109 46 0.1720 0.1468 0.3478 0.006 2cwq-a1-m2-cC_2cwq-a1-m1-cA, 2cwq-a1-m2-cC_2cwq-a1-m2-cB
6 2cwq-a1-m2-cB 122 46 0.1720 0.1311 0.3478 0.006 2cwq-a1-m2-cC_2cwq-a1-m2-cB
7 2cwq-a1-m1-cA 122 46 0.1720 0.1311 0.3478 0.006 2cwq-a1-m2-cC_2cwq-a1-m1-cA
8 7jm3-a1-m9-cC 251 56 0.1720 0.0637 0.2857 2.4 7jm3-a1-m1-cC_7jm3-a1-m9-cC
9 7jm3-a1-m1-cC 251 56 0.1720 0.0637 0.2857 2.4 7jm3-a1-m1-cC_7jm3-a1-m9-cC
10 6z5l-a1-m9-cA 251 56 0.1720 0.0637 0.2857 2.4 6z5l-a1-m11-cA_6z5l-a1-m9-cA
11 6z5l-a1-m11-cA 251 56 0.1720 0.0637 0.2857 2.4 6z5l-a1-m11-cA_6z5l-a1-m9-cA
12 5usx-a1-m1-cB 314 39 0.1613 0.0478 0.3846 3.0 5usx-a1-m1-cB_5usx-a1-m1-cA
13 5usx-a1-m1-cA 316 39 0.1613 0.0475 0.3846 3.0 5usx-a1-m1-cB_5usx-a1-m1-cA
14 7l6n-a1-m1-cC 675 34 0.1183 0.0163 0.3235 4.2 7l6n-a1-m1-cB_7l6n-a1-m1-cC
15 7l6n-a1-m1-cB 672 34 0.1183 0.0164 0.3235 4.3 7l6n-a1-m1-cB_7l6n-a1-m1-cC
16 2itm-a1-m1-cB 475 36 0.1290 0.0253 0.3333 7.4 2itm-a1-m1-cB_2itm-a1-m1-cA
17 2itm-a1-m1-cA 476 36 0.1290 0.0252 0.3333 7.4 2itm-a1-m1-cB_2itm-a1-m1-cA
18 7q9m-a1-m1-cC 975 22 0.1075 0.0103 0.4545 7.7 7q9m-a1-m1-cC_7q9m-a1-m1-cB
19 7fcd-a1-m1-cC 1027 22 0.1075 0.0097 0.4545 7.7 7fcd-a1-m1-cA_7fcd-a1-m1-cC
20 4nfz-a4-m4-cC 196 24 0.1075 0.0510 0.4167 7.8 4nfz-a4-m4-cA_4nfz-a4-m4-cC
21 4nfz-a4-m4-cA 196 24 0.1075 0.0510 0.4167 7.8 4nfz-a4-m2-cB_4nfz-a4-m4-cA, 4nfz-a4-m4-cA_4nfz-a4-m4-cC
22 4nfz-a4-m2-cB 196 24 0.1075 0.0510 0.4167 7.8 4nfz-a4-m2-cB_4nfz-a4-m4-cA

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Reference:
Jacob Schwartz et al.

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