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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
FHLTTRNGEPHMIVSRQEKGKSLLFKTEDGVNMCTLMADLGELCEDTITYKCPLLRQNEP
EDIDCWCNSTSTWVTYGTCT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8fe4-a1-m9-cD 80 80 1.0000 1.0000 1.0000 9.02e-57 8fe4-a1-m9-cB_8fe4-a1-m9-cD
2 8fe4-a1-m9-cB 80 80 1.0000 1.0000 1.0000 9.02e-57 8fe4-a1-m9-cB_8fe4-a1-m9-cD
3 3j42-a1-m9-cF 81 81 1.0000 0.9877 0.9877 6.45e-55 3j42-a1-m9-cE_3j42-a1-m9-cF
4 3j42-a1-m9-cE 81 81 1.0000 0.9877 0.9877 6.45e-55 3j42-a1-m9-cE_3j42-a1-m9-cF
5 4b03-a1-m9-cF 166 81 0.7875 0.3795 0.7778 1.46e-44 4b03-a1-m10-cE_4b03-a1-m9-cF
6 4b03-a1-m9-cE 166 81 0.7875 0.3795 0.7778 1.46e-44 4b03-a1-m9-cD_4b03-a1-m9-cE
7 4b03-a1-m9-cD 166 81 0.7875 0.3795 0.7778 1.46e-44 4b03-a1-m54-cD_4b03-a1-m9-cD, 4b03-a1-m9-cD_4b03-a1-m9-cE
8 4b03-a1-m54-cD 166 81 0.7875 0.3795 0.7778 1.46e-44 4b03-a1-m54-cD_4b03-a1-m9-cD
9 4b03-a1-m10-cE 166 81 0.7875 0.3795 0.7778 1.46e-44 4b03-a1-m10-cE_4b03-a1-m9-cF
10 3ixx-a1-m9-cF 80 80 0.4250 0.4250 0.4250 5.78e-18 3ixx-a1-m9-cE_3ixx-a1-m9-cF
11 3ixx-a1-m9-cE 80 80 0.4250 0.4250 0.4250 5.78e-18 3ixx-a1-m9-cE_3ixx-a1-m9-cF
12 5npi-a1-m1-cA 232 37 0.1500 0.0517 0.3243 1.1 5npi-a1-m1-cA_5npi-a1-m1-cB
13 5npi-a1-m1-cB 233 35 0.1500 0.0515 0.3429 2.2 5npi-a1-m1-cA_5npi-a1-m1-cB
14 4a64-a1-m1-cD 320 47 0.1875 0.0469 0.3191 5.3 4a64-a1-m1-cD_4a64-a1-m1-cA, 4a64-a1-m1-cD_4a64-a1-m1-cB, 4a64-a1-m1-cD_4a64-a1-m1-cC
15 4d63-a1-m3-cA 138 13 0.1000 0.0580 0.6154 8.9 4d63-a1-m2-cA_4d63-a1-m3-cA
16 4d63-a1-m2-cA 138 13 0.1000 0.0580 0.6154 8.9 4d63-a1-m2-cA_4d63-a1-m3-cA

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Reference:
Jacob Schwartz et al.

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