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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
FKDLNLTDAQKQQIREIMKGQRLEERRAMHDIIASDTFDKVKAEAQIAKMEEQRKANMLA
LMETQNKIYNILTPEQKKQFNANFEKR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5wo3-a1-m1-cB 87 87 1.0000 1.0000 1.0000 6.50e-59 5wo3-a1-m1-cB_5wo3-a1-m1-cA
2 5wo3-a1-m1-cA 90 88 1.0000 0.9667 0.9886 4.10e-57 5wo3-a1-m1-cB_5wo3-a1-m1-cA
3 6bie-a2-m4-cA 97 94 0.9885 0.8866 0.9149 5.77e-55 6bie-a2-m1-cA_6bie-a2-m4-cA
4 6bie-a2-m1-cA 97 94 0.9885 0.8866 0.9149 5.77e-55 6bie-a2-m1-cA_6bie-a2-m4-cA
5 6bie-a1-m2-cB 97 94 0.9885 0.8866 0.9149 5.77e-55 6bie-a1-m1-cA_6bie-a1-m2-cB
6 6bie-a1-m1-cA 97 94 0.9885 0.8866 0.9149 5.77e-55 6bie-a1-m1-cA_6bie-a1-m2-cB
7 3itf-a1-m1-cB 103 93 0.3103 0.2621 0.2903 0.070 3itf-a1-m1-cA_3itf-a1-m1-cB
8 3itf-a1-m1-cA 103 93 0.3103 0.2621 0.2903 0.070 3itf-a1-m1-cA_3itf-a1-m1-cB
9 4gd9-a1-m1-cD 122 16 0.1149 0.0820 0.6250 3.0 4gd9-a1-m1-cD_4gd9-a1-m1-cB
10 6lzy-a1-m1-cB 453 27 0.1379 0.0265 0.4444 3.9 6lzy-a1-m1-cB_6lzy-a1-m1-cA
11 6lzy-a1-m1-cA 454 27 0.1379 0.0264 0.4444 4.0 6lzy-a1-m1-cB_6lzy-a1-m1-cA
12 8gxl-a1-m1-cB 122 86 0.2759 0.1967 0.2791 5.0 8gxl-a1-m1-cA_8gxl-a1-m1-cB
13 2hwj-a3-m5-cD 190 29 0.1609 0.0737 0.4828 7.0 2hwj-a3-m5-cD_2hwj-a3-m5-cA
14 2hwj-a3-m1-cD 190 29 0.1609 0.0737 0.4828 7.0 2hwj-a3-m1-cB_2hwj-a3-m1-cD
15 2hwj-a3-m5-cB 186 29 0.1609 0.0753 0.4828 7.2 2hwj-a3-m1-cB_2hwj-a3-m5-cB
16 2hwj-a3-m1-cB 186 29 0.1609 0.0753 0.4828 7.2 2hwj-a3-m1-cB_2hwj-a3-m1-cD, 2hwj-a3-m1-cB_2hwj-a3-m5-cB
17 2hwj-a3-m4-cE 185 29 0.1609 0.0757 0.4828 7.4 2hwj-a3-m4-cE_2hwj-a3-m4-cF
18 2hwj-a3-m5-cA 193 29 0.1609 0.0725 0.4828 7.4 2hwj-a3-m5-cD_2hwj-a3-m5-cA
19 2h5n-a2-m6-cA 132 22 0.1264 0.0833 0.5000 7.6 2h5n-a2-m1-cA_2h5n-a2-m6-cA, 2h5n-a2-m4-cB_2h5n-a2-m6-cA, 2h5n-a2-m5-cB_2h5n-a2-m6-cA, 2h5n-a2-m6-cC_2h5n-a2-m6-cA
20 2h5n-a2-m1-cA 132 22 0.1264 0.0833 0.5000 7.6 2h5n-a2-m1-cA_2h5n-a2-m6-cA
21 2hwj-a3-m4-cF 187 29 0.1609 0.0749 0.4828 7.8 2hwj-a3-m4-cE_2hwj-a3-m4-cF
22 2h5n-a1-m1-cD 123 22 0.1264 0.0894 0.5000 8.2 2h5n-a1-m1-cD_2h5n-a1-m1-cC
23 2h5n-a2-m6-cC 124 22 0.1264 0.0887 0.5000 8.2 2h5n-a2-m6-cC_2h5n-a2-m6-cA
24 2h5n-a1-m1-cC 124 22 0.1264 0.0887 0.5000 8.2 2h5n-a1-m1-cD_2h5n-a1-m1-cC
25 2h5n-a2-m5-cB 122 22 0.1264 0.0902 0.5000 8.4 2h5n-a2-m4-cB_2h5n-a2-m5-cB, 2h5n-a2-m5-cB_2h5n-a2-m6-cA
26 2h5n-a2-m4-cB 122 22 0.1264 0.0902 0.5000 8.4 2h5n-a2-m4-cB_2h5n-a2-m5-cB, 2h5n-a2-m4-cB_2h5n-a2-m6-cA
27 6bhp-a1-m1-cC 170 33 0.1724 0.0882 0.4545 9.5 6bhp-a1-m1-cA_6bhp-a1-m1-cC
28 6bhp-a1-m1-cA 170 33 0.1724 0.0882 0.4545 9.5 6bhp-a1-m1-cA_6bhp-a1-m1-cC

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Reference:
Jacob Schwartz et al.

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