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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=84)
FKFHSGEKVLCFEPDPTKARVLYDAKIVDVIVGKDEKGRKIPEYLIHFNGWNRSWDRWAA
EDHVLRDTDENRRLQRKLARKAVA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3oa6-a1-m1-cB 84 84 1.0000 1.0000 1.0000 1.23e-58 3oa6-a1-m1-cA_3oa6-a1-m1-cB
2 3oa6-a1-m1-cA 84 84 1.0000 1.0000 1.0000 1.23e-58 3oa6-a1-m1-cA_3oa6-a1-m1-cB
3 5in1-a1-m1-cB 71 78 0.3452 0.4085 0.3718 7.99e-10 5in1-a1-m1-cA_5in1-a1-m1-cB
4 5in1-a1-m1-cA 71 78 0.3452 0.4085 0.3718 7.99e-10 5in1-a1-m1-cA_5in1-a1-m1-cB
5 6bph-a1-m2-cA 66 28 0.1190 0.1515 0.3571 0.053 6bph-a1-m1-cA_6bph-a1-m2-cA
6 6bph-a1-m1-cA 66 28 0.1190 0.1515 0.3571 0.053 6bph-a1-m1-cA_6bph-a1-m2-cA
7 4x3t-a3-m1-cE 51 23 0.1071 0.1765 0.3913 0.26 4x3t-a3-m1-cE_4x3t-a3-m1-cD
8 4x3t-a2-m1-cF 56 23 0.1071 0.1607 0.3913 0.26 4x3t-a2-m1-cF_4x3t-a2-m1-cC
9 4x3t-a3-m1-cD 62 23 0.1071 0.1452 0.3913 0.32 4x3t-a3-m1-cE_4x3t-a3-m1-cD
10 4x3t-a2-m1-cC 62 23 0.1071 0.1452 0.3913 0.32 4x3t-a2-m1-cF_4x3t-a2-m1-cC
11 5ejw-a2-m2-cA 80 23 0.1071 0.1125 0.3913 0.47 5ejw-a2-m1-cA_5ejw-a2-m2-cA
12 5ejw-a2-m1-cA 80 23 0.1071 0.1125 0.3913 0.47 5ejw-a2-m1-cA_5ejw-a2-m2-cA
13 2rje-a3-m1-cA 309 18 0.1071 0.0291 0.5000 0.67 2rje-a3-m1-cA_2rje-a3-m1-cB
14 2rje-a3-m1-cA 309 15 0.0714 0.0194 0.4000 8.7 2rje-a3-m1-cA_2rje-a3-m1-cB
15 2rjd-a2-m2-cA 321 18 0.1071 0.0280 0.5000 0.68 2rjd-a2-m1-cA_2rjd-a2-m2-cA
16 2rjd-a2-m2-cA 321 15 0.0714 0.0187 0.4000 8.8 2rjd-a2-m1-cA_2rjd-a2-m2-cA
17 2rjd-a2-m1-cA 321 18 0.1071 0.0280 0.5000 0.68 2rjd-a2-m1-cA_2rjd-a2-m2-cA
18 2rjd-a2-m1-cA 321 15 0.0714 0.0187 0.4000 8.8 2rjd-a2-m1-cA_2rjd-a2-m2-cA
19 2rje-a3-m1-cB 313 18 0.1071 0.0288 0.5000 0.71 2rje-a3-m1-cA_2rje-a3-m1-cB
20 2rje-a3-m1-cB 313 15 0.0714 0.0192 0.4000 9.0 2rje-a3-m1-cA_2rje-a3-m1-cB
21 5jjz-a2-m2-cA 59 42 0.1786 0.2542 0.3571 2.7 5jjz-a2-m1-cA_5jjz-a2-m2-cA
22 5jjz-a2-m1-cA 59 42 0.1786 0.2542 0.3571 2.7 5jjz-a2-m1-cA_5jjz-a2-m2-cA
23 7slw-a2-m1-cE 56 38 0.1667 0.2500 0.3684 2.8 7slw-a2-m1-cE_7slw-a2-m1-cF
24 1oz3-a1-m3-cC 308 18 0.1071 0.0292 0.5000 2.9 1oz3-a1-m1-cB_1oz3-a1-m3-cC, 1oz3-a1-m2-cC_1oz3-a1-m3-cC
25 1oz3-a1-m2-cC 308 18 0.1071 0.0292 0.5000 2.9 1oz3-a1-m2-cC_1oz3-a1-m3-cC
26 1oz3-a1-m1-cB 308 18 0.1071 0.0292 0.5000 2.9 1oz3-a1-m1-cB_1oz3-a1-m3-cC
27 7slw-a2-m1-cF 57 38 0.1667 0.2456 0.3684 3.2 7slw-a2-m1-cE_7slw-a2-m1-cF
28 5un7-a2-m2-cA 302 54 0.2024 0.0563 0.3148 3.7 5un7-a2-m1-cA_5un7-a2-m2-cA
29 5un7-a2-m1-cA 302 54 0.2024 0.0563 0.3148 3.7 5un7-a2-m1-cA_5un7-a2-m2-cA
30 1pfb-a2-m2-cA 55 25 0.0952 0.1455 0.3200 4.0 1pfb-a2-m1-cA_1pfb-a2-m2-cA
31 1pfb-a2-m1-cA 55 25 0.0952 0.1455 0.3200 4.0 1pfb-a2-m1-cA_1pfb-a2-m2-cA
32 3ut1-a1-m2-cA 313 23 0.1071 0.0288 0.3913 4.2 3ut1-a1-m1-cA_3ut1-a1-m2-cA
33 3ut1-a1-m2-cA 313 17 0.0952 0.0256 0.4706 4.7 3ut1-a1-m1-cA_3ut1-a1-m2-cA
34 3ut1-a1-m1-cA 313 23 0.1071 0.0288 0.3913 4.2 3ut1-a1-m1-cA_3ut1-a1-m2-cA
35 3ut1-a1-m1-cA 313 17 0.0952 0.0256 0.4706 4.7 3ut1-a1-m1-cA_3ut1-a1-m2-cA
36 4l59-a1-m2-cA 307 23 0.1071 0.0293 0.3913 4.4 4l59-a1-m1-cA_4l59-a1-m2-cA
37 4l59-a1-m2-cA 307 17 0.0952 0.0261 0.4706 4.9 4l59-a1-m1-cA_4l59-a1-m2-cA
38 4l59-a1-m1-cA 307 23 0.1071 0.0293 0.3913 4.4 4l59-a1-m1-cA_4l59-a1-m2-cA
39 4l59-a1-m1-cA 307 17 0.0952 0.0261 0.4706 4.9 4l59-a1-m1-cA_4l59-a1-m2-cA
40 4jw0-a1-m1-cD 95 24 0.0952 0.0842 0.3333 4.5 4jw0-a1-m1-cC_4jw0-a1-m1-cD
41 4jw0-a1-m1-cC 95 24 0.0952 0.0842 0.3333 4.5 4jw0-a1-m1-cC_4jw0-a1-m1-cD
42 1js2-a1-m1-cD 89 30 0.1548 0.1461 0.4333 5.7 1js2-a1-m1-cA_1js2-a1-m1-cD
43 1js2-a1-m1-cC 89 30 0.1548 0.1461 0.4333 5.7 1js2-a1-m1-cA_1js2-a1-m1-cC
44 1js2-a1-m1-cB 89 30 0.1548 0.1461 0.4333 5.7 1js2-a1-m1-cA_1js2-a1-m1-cB
45 1js2-a1-m1-cA 89 30 0.1548 0.1461 0.4333 5.7 1js2-a1-m1-cA_1js2-a1-m1-cB, 1js2-a1-m1-cA_1js2-a1-m1-cC, 1js2-a1-m1-cA_1js2-a1-m1-cD
46 3h91-a3-m2-cB 52 38 0.1310 0.2115 0.2895 6.1 3h91-a3-m1-cB_3h91-a3-m2-cB
47 3h91-a3-m1-cB 52 38 0.1310 0.2115 0.2895 6.1 3h91-a3-m1-cB_3h91-a3-m2-cB
48 4c5e-a1-m1-cB 439 13 0.0714 0.0137 0.4615 7.2 4c5e-a1-m1-cD_4c5e-a1-m1-cB
49 4c5e-a1-m1-cD 437 13 0.0714 0.0137 0.4615 7.3 4c5e-a1-m1-cD_4c5e-a1-m1-cB, 4c5e-a1-m1-cD_4c5e-a1-m1-cC
50 4c5e-a1-m1-cC 438 13 0.0714 0.0137 0.4615 7.3 4c5e-a1-m1-cD_4c5e-a1-m1-cC
51 4c5s-a1-m1-cD 640 20 0.1429 0.0187 0.6000 7.3 4c5s-a1-m1-cD_4c5s-a1-m1-cC
52 4c5s-a1-m1-cC 641 20 0.1429 0.0187 0.6000 7.3 4c5s-a1-m1-cD_4c5s-a1-m1-cC
53 2yii-a1-m1-cA 643 20 0.1429 0.0187 0.6000 7.3 2yii-a1-m1-cA_2yii-a1-m1-cD
54 2yii-a1-m1-cD 644 20 0.1429 0.0186 0.6000 7.3 2yii-a1-m1-cA_2yii-a1-m1-cD, 2yii-a1-m1-cD_2yii-a1-m1-cB
55 2yii-a1-m1-cB 649 20 0.1429 0.0185 0.6000 7.3 2yii-a1-m1-cD_2yii-a1-m1-cB
56 4ldd-a1-m2-cB 226 51 0.1786 0.0664 0.2941 8.1 4ldd-a1-m2-cC_4ldd-a1-m2-cB
57 4om8-a2-m3-cB 309 19 0.1071 0.0291 0.4737 8.7 4om8-a2-m1-cB_4om8-a2-m3-cB
58 4om8-a2-m1-cB 309 19 0.1071 0.0291 0.4737 8.7 4om8-a2-m1-cB_4om8-a2-m3-cB
59 4dq1-a1-m1-cB 300 31 0.1310 0.0367 0.3548 8.9 4dq1-a1-m1-cB_4dq1-a1-m1-cA
60 4dq1-a1-m1-cA 312 31 0.1310 0.0353 0.3548 9.4 4dq1-a1-m1-cB_4dq1-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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