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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=76)
FKPGDLVFAKMKGYPHWPARIDPPNKYPIFFFGTHETAFLGPKDLFPYDKCKDKYGKPNK
RKGFNEGLWEIQNNPH

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3qby-a1-m1-cC 76 76 1.0000 1.0000 1.0000 4.87e-52 3qby-a1-m1-cC_3qby-a1-m1-cA
2 3qby-a1-m1-cB 83 78 1.0000 0.9157 0.9744 2.05e-50 3qby-a1-m1-cB_3qby-a1-m1-cA
3 3qby-a1-m1-cA 93 85 1.0000 0.8172 0.8941 1.73e-49 3qby-a1-m1-cB_3qby-a1-m1-cA, 3qby-a1-m1-cC_3qby-a1-m1-cA
4 6iiq-a1-m1-cB 98 84 0.8684 0.6735 0.7857 2.64e-41 6iiq-a1-m1-cB_6iiq-a1-m1-cA
5 6iiq-a1-m1-cA 99 84 0.8684 0.6667 0.7857 2.72e-41 6iiq-a1-m1-cB_6iiq-a1-m1-cA
6 2nlu-a1-m1-cB 100 84 0.8158 0.6200 0.7381 4.90e-41 2nlu-a1-m1-cA_2nlu-a1-m1-cB
7 2nlu-a1-m1-cA 100 84 0.8158 0.6200 0.7381 4.90e-41 2nlu-a1-m1-cA_2nlu-a1-m1-cB
8 5xsk-a1-m1-cB 91 84 0.8158 0.6813 0.7381 1.04e-40 5xsk-a1-m1-cA_5xsk-a1-m1-cB
9 5xsk-a1-m1-cA 90 84 0.8158 0.6889 0.7381 1.07e-40 5xsk-a1-m1-cA_5xsk-a1-m1-cB
10 4rxj-a1-m2-cA 108 82 0.2895 0.2037 0.2683 0.003 4rxj-a1-m1-cA_4rxj-a1-m2-cA
11 4rxj-a1-m1-cA 108 82 0.2895 0.2037 0.2683 0.003 4rxj-a1-m1-cA_4rxj-a1-m2-cA
12 5nv2-a1-m1-cB 133 21 0.1447 0.0827 0.5238 0.29 5nv2-a1-m1-cA_5nv2-a1-m1-cB
13 5nv2-a1-m1-cA 133 21 0.1447 0.0827 0.5238 0.29 5nv2-a1-m1-cA_5nv2-a1-m1-cB
14 3fai-a2-m2-cA 227 51 0.2237 0.0749 0.3333 5.5 3fai-a2-m1-cA_3fai-a2-m2-cA
15 3fai-a2-m1-cA 227 51 0.2237 0.0749 0.3333 5.5 3fai-a2-m1-cA_3fai-a2-m2-cA
16 4wk5-a1-m2-cA 256 32 0.1579 0.0469 0.3750 6.5 4wk5-a1-m1-cA_4wk5-a1-m2-cA
17 4wk5-a1-m1-cA 256 32 0.1579 0.0469 0.3750 6.5 4wk5-a1-m1-cA_4wk5-a1-m2-cA
18 3i44-a1-m2-cA 476 18 0.1184 0.0189 0.5000 8.4 3i44-a1-m1-cA_3i44-a1-m2-cA
19 3i44-a1-m1-cA 476 18 0.1184 0.0189 0.5000 8.4 3i44-a1-m1-cA_3i44-a1-m2-cA
20 2p9j-a1-m1-cE 150 29 0.1447 0.0733 0.3793 9.4 2p9j-a1-m1-cE_2p9j-a1-m1-cA, 2p9j-a1-m1-cE_2p9j-a1-m1-cH

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Reference:
Jacob Schwartz et al.

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