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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
FLRHYTVSDPRTHPKGYTEYKVTAQFISVKEVVVWKRYSDFRKLHGDLAYTHRNLFRRLE
EFASVIEERRKGAEDLLRFTVHIPALNNSPQLKEFFRG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 6ecm-a1-m2-cA 98 98 1.0000 1.0000 1.0000 1.01e-69 6ecm-a1-m1-cA_6ecm-a1-m2-cA
2 6ecm-a1-m1-cA 98 98 1.0000 1.0000 1.0000 1.01e-69 6ecm-a1-m1-cA_6ecm-a1-m2-cA
3 6mbi-a1-m2-cA 101 100 0.9694 0.9406 0.9500 4.68e-63 6mbi-a1-m1-cA_6mbi-a1-m2-cA
4 6mbi-a1-m1-cA 101 100 0.9694 0.9406 0.9500 4.68e-63 6mbi-a1-m1-cA_6mbi-a1-m2-cA
5 6rxx-a1-m1-cUI 125 49 0.1837 0.1440 0.3673 0.051 6rxx-a1-m1-cUE_6rxx-a1-m1-cUI
6 6rxx-a1-m1-cUE 125 49 0.1837 0.1440 0.3673 0.051 6rxx-a1-m1-cUE_6rxx-a1-m1-cUI
7 7d6e-a1-m1-cR 380 117 0.3061 0.0789 0.2564 0.38 7d6e-a1-m1-cQ_7d6e-a1-m1-cR
8 7d6e-a1-m1-cQ 380 117 0.3061 0.0789 0.2564 0.38 7d6e-a1-m1-cQ_7d6e-a1-m1-cR
9 4az9-a2-m1-cB 114 76 0.2245 0.1930 0.2895 3.2 4az9-a2-m3-cA_4az9-a2-m1-cB
10 4az9-a2-m3-cA 111 76 0.2245 0.1982 0.2895 3.3 4az9-a2-m3-cA_4az9-a2-m1-cB
11 3cgm-a2-m6-cA 157 43 0.1735 0.1083 0.3953 5.4 3cgm-a2-m3-cA_3cgm-a2-m6-cA, 3cgm-a2-m4-cA_3cgm-a2-m6-cA, 3cgm-a2-m5-cA_3cgm-a2-m6-cA
12 3cgm-a2-m5-cA 157 43 0.1735 0.1083 0.3953 5.4 3cgm-a2-m5-cA_3cgm-a2-m6-cA
13 3cgm-a2-m4-cA 157 43 0.1735 0.1083 0.3953 5.4 3cgm-a2-m4-cA_3cgm-a2-m6-cA
14 3cgm-a2-m3-cA 157 43 0.1735 0.1083 0.3953 5.4 3cgm-a2-m3-cA_3cgm-a2-m6-cA
15 3cgn-a2-m2-cA 151 42 0.1735 0.1126 0.4048 6.0 3cgn-a2-m1-cA_3cgn-a2-m2-cA
16 3cgn-a2-m1-cA 151 42 0.1735 0.1126 0.4048 6.0 3cgn-a2-m1-cA_3cgn-a2-m2-cA
17 5gw1-a1-m1-cB 170 88 0.2245 0.1294 0.2500 8.1 5gw1-a1-m1-cB_5gw1-a1-m1-cA
18 3if2-a1-m1-cB 427 39 0.1429 0.0328 0.3590 9.7 3if2-a1-m1-cA_3if2-a1-m1-cB
19 3if2-a1-m1-cA 427 39 0.1429 0.0328 0.3590 9.7 3if2-a1-m1-cA_3if2-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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