Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=80)
FNDPFLHELEKLRRESENSKKTFEEKKSILKAELERKMAEVQAEFRRKFHEVEAEHNTRT
TKIEKDKNLVIMNKLLANAF

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3vem-a2-m1-cD 80 80 1.0000 1.0000 1.0000 1.88e-51 3vem-a2-m1-cD_3vem-a2-m1-cC
2 3vem-a2-m1-cC 83 80 1.0000 0.9639 1.0000 3.05e-51 3vem-a2-m1-cD_3vem-a2-m1-cC
3 4d90-a3-m1-cB 126 36 0.1375 0.0873 0.3056 0.24 4d90-a3-m1-cB_4d90-a3-m1-cA
4 4d90-a3-m1-cA 127 32 0.1375 0.0866 0.3438 0.24 4d90-a3-m1-cB_4d90-a3-m1-cA
5 3r7t-a1-m4-cA 399 58 0.2250 0.0451 0.3103 1.4 3r7t-a1-m1-cA_3r7t-a1-m4-cA, 3r7t-a1-m2-cA_3r7t-a1-m4-cA
6 3r7t-a1-m2-cA 399 58 0.2250 0.0451 0.3103 1.4 3r7t-a1-m2-cA_3r7t-a1-m4-cA
7 3r7t-a1-m1-cA 399 58 0.2250 0.0451 0.3103 1.4 3r7t-a1-m1-cA_3r7t-a1-m4-cA
8 6jsj-a1-m1-cC 619 50 0.1875 0.0242 0.3000 2.9 6jsj-a1-m1-cC_6jsj-a1-m1-cA
9 6jsj-a1-m1-cA 625 50 0.1875 0.0240 0.3000 3.1 6jsj-a1-m1-cC_6jsj-a1-m1-cA
10 5o34-a1-m1-cB 203 18 0.1125 0.0443 0.5000 9.5 5o34-a1-m1-cC_5o34-a1-m1-cB
11 7kff-a1-m2-cA 244 29 0.1375 0.0451 0.3793 9.9 7kff-a1-m1-cA_7kff-a1-m2-cA
12 7kff-a1-m1-cA 244 29 0.1375 0.0451 0.3793 9.9 7kff-a1-m1-cA_7kff-a1-m2-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600