Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=50)
FNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2o98-a1-m1-cP 52 50 1.0000 0.9615 1.0000 8.27e-31 2o98-a1-m1-cQ_2o98-a1-m1-cP
2 2o98-a1-m1-cQ 50 50 1.0000 1.0000 1.0000 9.10e-31 2o98-a1-m1-cQ_2o98-a1-m1-cP
3 2z1m-a1-m1-cD 338 26 0.2000 0.0296 0.3846 2.0 2z1m-a1-m1-cA_2z1m-a1-m1-cD, 2z1m-a1-m1-cC_2z1m-a1-m1-cD
4 2z1m-a1-m1-cA 338 26 0.2000 0.0296 0.3846 2.0 2z1m-a1-m1-cA_2z1m-a1-m1-cD, 2z1m-a1-m1-cC_2z1m-a1-m1-cA
5 2z1m-a1-m1-cB 332 26 0.2000 0.0301 0.3846 2.2 2z1m-a1-m1-cB_2z1m-a1-m1-cC
6 2z1m-a1-m1-cC 336 26 0.2000 0.0298 0.3846 2.2 2z1m-a1-m1-cB_2z1m-a1-m1-cC, 2z1m-a1-m1-cC_2z1m-a1-m1-cA, 2z1m-a1-m1-cC_2z1m-a1-m1-cD
7 8su6-a1-m1-cB 365 24 0.2600 0.0356 0.5417 2.7 8su6-a1-m1-cB_8su6-a1-m1-cA
8 8su6-a1-m1-cA 367 24 0.2600 0.0354 0.5417 2.7 8su6-a1-m1-cB_8su6-a1-m1-cA
9 4rzm-a3-m2-cB 283 29 0.2200 0.0389 0.3793 6.0 4rzm-a3-m1-cA_4rzm-a3-m2-cB, 4rzm-a3-m1-cB_4rzm-a3-m2-cB, 4rzm-a3-m2-cA_4rzm-a3-m2-cB
10 4rzm-a3-m1-cB 283 29 0.2200 0.0389 0.3793 6.0 4rzm-a3-m1-cB_4rzm-a3-m2-cB
11 4rzm-a3-m2-cA 274 29 0.2200 0.0401 0.3793 6.8 4rzm-a3-m2-cA_4rzm-a3-m2-cB
12 4rzm-a3-m1-cA 274 29 0.2200 0.0401 0.3793 6.8 4rzm-a3-m1-cA_4rzm-a3-m2-cB
13 6gwu-a1-m1-cC 204 51 0.3400 0.0833 0.3333 8.4 6gwu-a1-m1-cD_6gwu-a1-m1-cC
14 6gwu-a1-m1-cD 202 51 0.3400 0.0842 0.3333 9.0 6gwu-a1-m1-cD_6gwu-a1-m1-cA, 6gwu-a1-m1-cD_6gwu-a1-m1-cB, 6gwu-a1-m1-cD_6gwu-a1-m1-cC
15 6gwu-a1-m1-cB 205 51 0.3400 0.0829 0.3333 9.0 6gwu-a1-m1-cD_6gwu-a1-m1-cB
16 6gwu-a1-m1-cA 208 51 0.3400 0.0817 0.3333 9.3 6gwu-a1-m1-cD_6gwu-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600