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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=50)
FNELNQLAEEAKRRAEIARQRELHTLKGHVESVVKLKGLDIETIQQSYDI

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2o98-a1-m1-cP 52 50 1.0000 0.9615 1.0000 8.27e-31 2o98-a1-m1-cQ_2o98-a1-m1-cP
2 2o98-a1-m1-cQ 50 50 1.0000 1.0000 1.0000 9.10e-31 2o98-a1-m1-cQ_2o98-a1-m1-cP
3 2z1m-a1-m1-cD 338 26 0.2000 0.0296 0.3846 2.0 2z1m-a1-m1-cA_2z1m-a1-m1-cD, 2z1m-a1-m1-cC_2z1m-a1-m1-cD
4 2z1m-a1-m1-cA 338 26 0.2000 0.0296 0.3846 2.0 2z1m-a1-m1-cA_2z1m-a1-m1-cD, 2z1m-a1-m1-cC_2z1m-a1-m1-cA
5 2z1m-a1-m1-cB 332 26 0.2000 0.0301 0.3846 2.2 2z1m-a1-m1-cB_2z1m-a1-m1-cC
6 2z1m-a1-m1-cC 336 26 0.2000 0.0298 0.3846 2.2 2z1m-a1-m1-cB_2z1m-a1-m1-cC, 2z1m-a1-m1-cC_2z1m-a1-m1-cA, 2z1m-a1-m1-cC_2z1m-a1-m1-cD
7 8su6-a1-m1-cB 365 24 0.2600 0.0356 0.5417 2.7 8su6-a1-m1-cB_8su6-a1-m1-cA
8 8su6-a1-m1-cA 367 24 0.2600 0.0354 0.5417 2.7 8su6-a1-m1-cB_8su6-a1-m1-cA
9 4rzm-a3-m2-cB 283 29 0.2200 0.0389 0.3793 6.0 4rzm-a3-m1-cA_4rzm-a3-m2-cB, 4rzm-a3-m1-cB_4rzm-a3-m2-cB, 4rzm-a3-m2-cA_4rzm-a3-m2-cB
10 4rzm-a3-m1-cB 283 29 0.2200 0.0389 0.3793 6.0 4rzm-a3-m1-cB_4rzm-a3-m2-cB
11 4rzm-a3-m2-cA 274 29 0.2200 0.0401 0.3793 6.8 4rzm-a3-m2-cA_4rzm-a3-m2-cB
12 4rzm-a3-m1-cA 274 29 0.2200 0.0401 0.3793 6.8 4rzm-a3-m1-cA_4rzm-a3-m2-cB
13 6gwu-a1-m1-cC 204 51 0.3400 0.0833 0.3333 8.4 6gwu-a1-m1-cD_6gwu-a1-m1-cC
14 6gwu-a1-m1-cD 202 51 0.3400 0.0842 0.3333 9.0 6gwu-a1-m1-cD_6gwu-a1-m1-cA, 6gwu-a1-m1-cD_6gwu-a1-m1-cB, 6gwu-a1-m1-cD_6gwu-a1-m1-cC
15 6gwu-a1-m1-cB 205 51 0.3400 0.0829 0.3333 9.0 6gwu-a1-m1-cD_6gwu-a1-m1-cB
16 6gwu-a1-m1-cA 208 51 0.3400 0.0817 0.3333 9.3 6gwu-a1-m1-cD_6gwu-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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