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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=66)
FNINDRIKELGTLIPKSNDWNKGTILKASVDYIRKLQREQQRLENRQKKLEHANRHLLLR
IQELGG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7eod-a2-m1-cC 66 66 1.0000 1.0000 1.0000 6.28e-43 7eod-a2-m1-cC_7eod-a2-m1-cD
2 7eod-a2-m1-cD 69 69 0.9848 0.9420 0.9420 1.90e-39 7eod-a2-m1-cC_7eod-a2-m1-cD
3 7d8r-a2-m1-cD 174 68 0.9697 0.3678 0.9412 7.00e-37 7d8r-a2-m1-cC_7d8r-a2-m1-cD
4 7d8t-a1-m1-cB 199 72 0.9697 0.3216 0.8889 3.65e-36 7d8t-a1-m1-cA_7d8t-a1-m1-cB
5 7d8t-a1-m1-cA 199 72 0.9697 0.3216 0.8889 3.65e-36 7d8t-a1-m1-cA_7d8t-a1-m1-cB
6 6fx5-a1-m1-cB 74 68 0.8788 0.7838 0.8529 1.07e-34 6fx5-a1-m1-cA_6fx5-a1-m1-cB
7 7d8s-a2-m1-cD 175 68 0.9242 0.3486 0.8971 2.59e-34 7d8s-a2-m1-cD_7d8s-a2-m1-cC
8 7d8s-a2-m1-cC 184 68 0.9242 0.3315 0.8971 8.34e-34 7d8s-a2-m1-cD_7d8s-a2-m1-cC
9 6fx5-a1-m1-cA 72 66 0.8485 0.7778 0.8485 6.67e-33 6fx5-a1-m1-cA_6fx5-a1-m1-cB
10 7d8r-a2-m1-cC 168 67 0.8939 0.3512 0.8806 9.48e-32 7d8r-a2-m1-cC_7d8r-a2-m1-cD
11 7f09-a2-m1-cC 67 68 0.8333 0.8209 0.8088 3.92e-30 7f09-a2-m1-cD_7f09-a2-m1-cC
12 7f09-a2-m1-cD 65 68 0.8182 0.8308 0.7941 1.93e-29 7f09-a2-m1-cD_7f09-a2-m1-cC
13 7y62-a1-m1-cA 74 73 0.7424 0.6622 0.6712 4.13e-27 7y62-a1-m1-cB_7y62-a1-m1-cA
14 7y62-a1-m1-cB 69 69 0.7121 0.6812 0.6812 1.15e-25 7y62-a1-m1-cB_7y62-a1-m1-cA
15 1am9-a1-m1-cD 76 44 0.2727 0.2368 0.4091 7.99e-04 1am9-a1-m1-cD_1am9-a1-m1-cC
16 1am9-a1-m1-cC 82 44 0.2727 0.2195 0.4091 0.001 1am9-a1-m1-cD_1am9-a1-m1-cC
17 6u2u-a1-m1-cB 44 34 0.2273 0.3409 0.4412 0.017 6u2u-a1-m1-cB_6u2u-a1-m1-cA
18 6u2u-a1-m1-cA 46 34 0.2273 0.3261 0.4412 0.018 6u2u-a1-m1-cB_6u2u-a1-m1-cA
19 4aya-a1-m1-cB 48 40 0.2424 0.3333 0.4000 0.048 4aya-a1-m1-cB_4aya-a1-m1-cA
20 4aya-a1-m1-cA 59 40 0.2424 0.2712 0.4000 0.074 4aya-a1-m1-cB_4aya-a1-m1-cA
21 7f2f-a1-m1-cB 94 76 0.3939 0.2766 0.3421 0.27 7f2f-a1-m1-cA_7f2f-a1-m1-cB
22 7f2f-a1-m1-cA 90 49 0.2727 0.2000 0.3673 0.39 7f2f-a1-m1-cA_7f2f-a1-m1-cB
23 1an4-a1-m1-cB 65 46 0.2424 0.2462 0.3478 1.7 1an4-a1-m1-cA_1an4-a1-m1-cB
24 1an4-a1-m1-cA 65 46 0.2424 0.2462 0.3478 1.7 1an4-a1-m1-cA_1an4-a1-m1-cB
25 2lfh-a1-m1-cB 68 32 0.1667 0.1618 0.3438 3.6 2lfh-a1-m1-cA_2lfh-a1-m1-cB
26 2lfh-a1-m1-cA 68 32 0.1667 0.1618 0.3438 3.6 2lfh-a1-m1-cA_2lfh-a1-m1-cB
27 5gnj-a2-m1-cA 74 35 0.1364 0.1216 0.2571 6.7 5gnj-a2-m1-cA_5gnj-a2-m1-cB
28 5gnj-a2-m1-cB 77 35 0.1364 0.1169 0.2571 6.8 5gnj-a2-m1-cA_5gnj-a2-m1-cB
29 8glv-a1-m1-cGt 4520 21 0.1515 0.0022 0.4762 9.0 8glv-a1-m1-cDb_8glv-a1-m1-cGt
30 8glv-a1-m1-cDb 4520 21 0.1515 0.0022 0.4762 9.0 8glv-a1-m1-cDb_8glv-a1-m1-cGt

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Reference:
Jacob Schwartz et al.

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