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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=78)
FNKTPKEKFIEIIQNGNLGALEKVFEEFFADHIAVELLEKQGLTEDVKNFILENGDFIEE
RQNDIYIELGAKILGHEG

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4npx-a1-m2-cA 78 78 1.0000 1.0000 1.0000 5.91e-50 4npx-a1-m1-cA_4npx-a1-m2-cA
2 4npx-a1-m1-cA 78 78 1.0000 1.0000 1.0000 5.91e-50 4npx-a1-m1-cA_4npx-a1-m2-cA
3 7d95-a1-m1-cB 186 38 0.2179 0.0914 0.4474 2.9 7d95-a1-m1-cA_7d95-a1-m1-cB
4 7d95-a1-m1-cA 186 38 0.2179 0.0914 0.4474 2.9 7d95-a1-m1-cA_7d95-a1-m1-cB
5 4az9-a2-m1-cB 114 70 0.2564 0.1754 0.2857 3.6 4az9-a2-m3-cA_4az9-a2-m1-cB
6 4az9-a2-m3-cA 111 70 0.2564 0.1802 0.2857 3.7 4az9-a2-m3-cA_4az9-a2-m1-cB
7 2qyv-a1-m1-cB 463 52 0.2308 0.0389 0.3462 4.1 2qyv-a1-m1-cB_2qyv-a1-m1-cA
8 2qyv-a1-m1-cA 465 52 0.2308 0.0387 0.3462 4.3 2qyv-a1-m1-cB_2qyv-a1-m1-cA
9 7a0h-a1-m1-cB 255 60 0.2179 0.0667 0.2833 6.8 7a0h-a1-m1-cB_7a0h-a1-m1-cA
10 7a0h-a1-m1-cA 285 60 0.2179 0.0596 0.2833 7.0 7a0h-a1-m1-cB_7a0h-a1-m1-cA
11 5nks-a1-m4-cA 490 26 0.1795 0.0286 0.5385 8.2 5nks-a1-m1-cA_5nks-a1-m4-cA, 5nks-a1-m3-cA_5nks-a1-m4-cA
12 5nks-a1-m3-cA 490 26 0.1795 0.0286 0.5385 8.2 5nks-a1-m3-cA_5nks-a1-m4-cA
13 5nks-a1-m1-cA 490 26 0.1795 0.0286 0.5385 8.2 5nks-a1-m1-cA_5nks-a1-m4-cA
14 6oib-a1-m1-cB 406 53 0.2308 0.0443 0.3396 8.6 6oib-a1-m1-cB_6oib-a1-m1-cA
15 6oib-a1-m1-cA 407 53 0.2308 0.0442 0.3396 8.6 6oib-a1-m1-cB_6oib-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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