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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=95)
FPPQITVQPETQSAIGSDVSFTCSAASSSDSPTFAWDNEALQDAEENYAHLRAQGGELEY
TTILRLRNVEFTSEGYQCVISNHFGSSYSVALTIN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3so5-a2-m1-cA 95 95 1.0000 1.0000 1.0000 1.93e-67 3so5-a2-m1-cA_3so5-a2-m2-cB
2 3so5-a1-m1-cA 95 95 1.0000 1.0000 1.0000 1.93e-67 3so5-a1-m1-cA_3so5-a1-m1-cB
3 3so5-a2-m2-cB 101 95 1.0000 0.9406 1.0000 3.90e-67 3so5-a2-m1-cA_3so5-a2-m2-cB
4 3so5-a1-m1-cB 101 95 1.0000 0.9406 1.0000 3.90e-67 3so5-a1-m1-cA_3so5-a1-m1-cB
5 1cs6-a1-m2-cA 382 94 0.3158 0.0785 0.3191 2.01e-05 1cs6-a1-m1-cA_1cs6-a1-m2-cA
6 1cs6-a1-m1-cA 382 94 0.3158 0.0785 0.3191 2.01e-05 1cs6-a1-m1-cA_1cs6-a1-m2-cA
7 7ol2-a1-m1-cB 568 92 0.2842 0.0475 0.2935 0.002 7ol2-a1-m1-cA_7ol2-a1-m1-cB
8 7ol2-a1-m1-cA 568 92 0.2842 0.0475 0.2935 0.002 7ol2-a1-m1-cA_7ol2-a1-m1-cB
9 2yd6-a1-m2-cA 195 97 0.2632 0.1282 0.2577 0.006 2yd6-a1-m1-cA_2yd6-a1-m2-cA
10 2yd6-a1-m2-cA 195 88 0.2526 0.1231 0.2727 2.3 2yd6-a1-m1-cA_2yd6-a1-m2-cA
11 2yd6-a1-m1-cA 195 97 0.2632 0.1282 0.2577 0.006 2yd6-a1-m1-cA_2yd6-a1-m2-cA
12 2yd6-a1-m1-cA 195 88 0.2526 0.1231 0.2727 2.3 2yd6-a1-m1-cA_2yd6-a1-m2-cA
13 4yfg-a1-m1-cB 481 97 0.2632 0.0520 0.2577 0.009 4yfg-a1-m1-cA_4yfg-a1-m1-cB
14 4yfg-a1-m1-cB 481 91 0.2632 0.0520 0.2747 0.99 4yfg-a1-m1-cA_4yfg-a1-m1-cB
15 4yfg-a1-m1-cA 481 97 0.2632 0.0520 0.2577 0.009 4yfg-a1-m1-cA_4yfg-a1-m1-cB
16 4yfg-a1-m1-cA 481 91 0.2632 0.0520 0.2747 0.99 4yfg-a1-m1-cA_4yfg-a1-m1-cB
17 7z4a-a1-m9-cG 306 53 0.2000 0.0621 0.3585 0.14 7z4a-a1-m8-cG_7z4a-a1-m9-cG
18 7z4a-a1-m8-cG 306 53 0.2000 0.0621 0.3585 0.14 7z4a-a1-m8-cG_7z4a-a1-m9-cF, 7z4a-a1-m8-cG_7z4a-a1-m9-cG
19 7ysu-a1-m1-cC 211 70 0.2316 0.1043 0.3143 0.22 7ysu-a1-m1-cE_7ysu-a1-m1-cC
20 7ysu-a1-m1-cE 210 70 0.2316 0.1048 0.3143 0.23 7ysu-a1-m1-cE_7ysu-a1-m1-cC
21 6uk3-a2-m1-cD 475 54 0.1789 0.0358 0.3148 1.1 6uk3-a2-m1-cB_6uk3-a2-m1-cD
22 6uk3-a2-m1-cB 475 54 0.1789 0.0358 0.3148 1.1 6uk3-a2-m1-cB_6uk3-a2-m1-cD
23 2iep-a3-m4-cA 187 93 0.2737 0.1390 0.2796 1.3 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m4-cA_2iep-a3-m4-cB
24 2iep-a3-m1-cA 187 93 0.2737 0.1390 0.2796 1.3 2iep-a3-m1-cA_2iep-a3-m4-cA, 2iep-a3-m1-cA_2iep-a3-m4-cB
25 2iep-a2-m3-cA 187 93 0.2737 0.1390 0.2796 1.3 2iep-a2-m1-cB_2iep-a2-m3-cA
26 2iep-a3-m4-cB 187 93 0.2737 0.1390 0.2796 1.5 2iep-a3-m1-cA_2iep-a3-m4-cB, 2iep-a3-m1-cB_2iep-a3-m4-cB, 2iep-a3-m4-cA_2iep-a3-m4-cB
27 2iep-a3-m1-cB 187 93 0.2737 0.1390 0.2796 1.5 2iep-a3-m1-cB_2iep-a3-m4-cB
28 2iep-a2-m1-cB 187 93 0.2737 0.1390 0.2796 1.5 2iep-a2-m1-cB_2iep-a2-m3-cA
29 7z4a-a1-m9-cF 347 43 0.1474 0.0403 0.3256 1.8 7z4a-a1-m8-cG_7z4a-a1-m9-cF
30 7y73-a1-m1-cA 98 81 0.2105 0.2041 0.2469 1.9 7y73-a1-m1-cB_7y73-a1-m1-cA
31 2yd9-a1-m2-cA 278 88 0.2632 0.0899 0.2841 7.6 2yd9-a1-m1-cA_2yd9-a1-m2-cA
32 2yd9-a1-m1-cA 278 88 0.2632 0.0899 0.2841 7.6 2yd9-a1-m1-cA_2yd9-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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