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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=98)
FQGAMAMFWGLNMKPERKYSQTIIKSFHISGVALDKGQEAKLYLAAEKQEYIVATVTKAI
PQVALDLNFSKGDRIMFYTAGDASVSLLGYLHDIDSGS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ca9-a1-m1-cE 98 98 1.0000 1.0000 1.0000 1.14e-69 4ca9-a1-m1-cD_4ca9-a1-m1-cE
2 4ca9-a1-m1-cD 98 98 1.0000 1.0000 1.0000 1.14e-69 4ca9-a1-m1-cD_4ca9-a1-m1-cE
3 1mww-a1-m1-cC 120 50 0.1735 0.1417 0.3400 3.7 1mww-a1-m1-cA_1mww-a1-m1-cC
4 1mww-a1-m1-cA 120 50 0.1735 0.1417 0.3400 3.7 1mww-a1-m1-cA_1mww-a1-m1-cC
5 5y69-a1-m1-cB 143 23 0.1020 0.0699 0.4348 5.6 5y69-a1-m1-cB_5y69-a1-m1-cA
6 5y69-a1-m1-cA 146 23 0.1020 0.0685 0.4348 6.0 5y69-a1-m1-cB_5y69-a1-m1-cA
7 3hdv-a3-m1-cD 114 44 0.1531 0.1316 0.3409 8.0 3hdv-a3-m1-cD_3hdv-a3-m1-cB
8 3hdv-a1-m1-cC 118 44 0.1531 0.1271 0.3409 8.8 3hdv-a1-m1-cC_3hdv-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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