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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
FQGFITTEGINAGYTIKDVVEATSSLLASEDIDKYNFDQLFDEAKQKLKKKADLLEGDGI
IGLKYNTEVVEVNGAPKFLVVHGYGTVILID

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3qkb-a1-m1-cA 91 91 1.0000 1.0000 1.0000 6.34e-61 3qkb-a1-m1-cB_3qkb-a1-m1-cA
2 3qkb-a1-m1-cB 90 90 0.9890 1.0000 1.0000 4.30e-60 3qkb-a1-m1-cB_3qkb-a1-m1-cA
3 2d3w-a1-m1-cC 241 55 0.1648 0.0622 0.2727 0.18 2d3w-a1-m1-cC_2d3w-a1-m1-cD
4 2d3w-a1-m1-cD 243 55 0.1648 0.0617 0.2727 0.18 2d3w-a1-m1-cC_2d3w-a1-m1-cD
5 3a28-a2-m1-cH 257 39 0.1868 0.0661 0.4359 2.0 3a28-a2-m1-cE_3a28-a2-m1-cH, 3a28-a2-m1-cG_3a28-a2-m1-cH
6 3a28-a2-m1-cG 257 39 0.1868 0.0661 0.4359 2.0 3a28-a2-m1-cG_3a28-a2-m1-cH
7 3a28-a2-m1-cE 257 39 0.1868 0.0661 0.4359 2.0 3a28-a2-m1-cE_3a28-a2-m1-cH
8 3hd5-a1-m1-cC 176 63 0.1868 0.0966 0.2698 9.5 3hd5-a1-m1-cB_3hd5-a1-m1-cC, 3hd5-a1-m1-cC_3hd5-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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