Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
FREIELRGHIIDSLILPKVFDKILDGGDYKVLEFEIGKRKTDPSYAKILVIGRDERHVDE
ILNELRDLGAEIPEIEEVELQPA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3mgj-a1-m1-cB 83 83 1.0000 1.0000 1.0000 1.41e-53 3mgj-a1-m1-cB_3mgj-a1-m1-cA
2 3mgj-a1-m1-cA 93 83 1.0000 0.8925 1.0000 3.64e-53 3mgj-a1-m1-cB_3mgj-a1-m1-cA
3 6juy-a1-m1-cD 623 76 0.3133 0.0417 0.3421 9.06e-08 6juy-a1-m1-cD_6juy-a1-m1-cA, 6juy-a1-m1-cD_6juy-a1-m1-cB, 6juy-a1-m1-cD_6juy-a1-m1-cC
4 6juy-a1-m1-cC 656 76 0.3133 0.0396 0.3421 9.18e-08 6juy-a1-m1-cD_6juy-a1-m1-cC
5 6juy-a1-m1-cB 637 76 0.3133 0.0408 0.3421 9.91e-08 6juy-a1-m1-cD_6juy-a1-m1-cB
6 6juy-a1-m1-cA 639 76 0.3133 0.0407 0.3421 9.91e-08 6juy-a1-m1-cD_6juy-a1-m1-cA
7 1ffv-a1-m1-cE 795 31 0.1446 0.0151 0.3871 1.1 1ffv-a1-m1-cB_1ffv-a1-m1-cE
8 1ffv-a1-m1-cB 795 31 0.1446 0.0151 0.3871 1.1 1ffv-a1-m1-cB_1ffv-a1-m1-cE
9 4wt4-a1-m1-cC 150 46 0.2048 0.1133 0.3696 1.4 4wt4-a1-m1-cA_4wt4-a1-m1-cC
10 4wt4-a1-m1-cA 148 46 0.2048 0.1149 0.3696 1.4 4wt4-a1-m1-cA_4wt4-a1-m1-cC
11 6ckm-a1-m2-cA 225 27 0.1566 0.0578 0.4815 2.0 6ckm-a1-m1-cA_6ckm-a1-m2-cA
12 6ckm-a1-m1-cA 225 27 0.1566 0.0578 0.4815 2.0 6ckm-a1-m1-cA_6ckm-a1-m2-cA
13 2bgw-a1-m1-cB 200 45 0.2289 0.0950 0.4222 5.6 2bgw-a1-m1-cB_2bgw-a1-m1-cA
14 2bhn-a2-m3-cC 194 45 0.2289 0.0979 0.4222 5.8 2bhn-a2-m3-cC_2bhn-a2-m3-cD
15 2bhn-a2-m1-cC 194 45 0.2289 0.0979 0.4222 5.8 2bhn-a2-m1-cC_2bhn-a2-m3-cD
16 2bhn-a2-m3-cD 211 45 0.2289 0.0900 0.4222 5.8 2bhn-a2-m1-cC_2bhn-a2-m3-cD, 2bhn-a2-m1-cD_2bhn-a2-m3-cD, 2bhn-a2-m3-cC_2bhn-a2-m3-cD
17 2bhn-a2-m1-cD 211 45 0.2289 0.0900 0.4222 5.8 2bhn-a2-m1-cD_2bhn-a2-m3-cD
18 2bgw-a1-m1-cA 219 45 0.2289 0.0868 0.4222 6.0 2bgw-a1-m1-cB_2bgw-a1-m1-cA
19 7v8s-a1-m1-cB 529 30 0.1446 0.0227 0.4000 7.2 7v8s-a1-m1-cA_7v8s-a1-m1-cB
20 7v8s-a1-m1-cA 529 30 0.1446 0.0227 0.4000 7.2 7v8s-a1-m1-cA_7v8s-a1-m1-cB
21 7v8o-a1-m1-cB 529 30 0.1446 0.0227 0.4000 7.2 7v8o-a1-m1-cA_7v8o-a1-m1-cB
22 7v8o-a1-m1-cA 529 30 0.1446 0.0227 0.4000 7.2 7v8o-a1-m1-cA_7v8o-a1-m1-cB
23 3nrr-a1-m1-cA 503 27 0.1205 0.0199 0.3704 9.7 3nrr-a1-m1-cB_3nrr-a1-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600