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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
FSREEADTLRLKVEELEGERSRLEEEKRMLEAQLERRALQGDYDQSRTKVLHMSLNPTSV
ARQRLREDHSQLQAECERLRGLLRAME

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 1go4-a1-m1-cG 100 87 1.0000 0.8700 1.0000 2.93e-56 1go4-a1-m1-cH_1go4-a1-m1-cG
2 1go4-a1-m1-cH 93 87 1.0000 0.9355 1.0000 3.00e-56 1go4-a1-m1-cE_1go4-a1-m1-cH, 1go4-a1-m1-cH_1go4-a1-m1-cG
3 1go4-a1-m1-cF 87 87 1.0000 1.0000 1.0000 3.15e-56 1go4-a1-m1-cE_1go4-a1-m1-cF
4 1go4-a1-m1-cE 87 87 1.0000 1.0000 1.0000 3.15e-56 1go4-a1-m1-cE_1go4-a1-m1-cF, 1go4-a1-m1-cE_1go4-a1-m1-cH
5 7khv-a3-m1-cE 586 39 0.1954 0.0290 0.4359 0.97 7khv-a3-m1-cF_7khv-a3-m1-cE
6 7khv-a3-m1-cF 539 39 0.1954 0.0315 0.4359 1.4 7khv-a3-m1-cF_7khv-a3-m1-cE
7 1uqt-a1-m1-cB 450 61 0.2184 0.0422 0.3115 2.9 1uqt-a1-m1-cB_1uqt-a1-m1-cA
8 1uqu-a1-m1-cA 452 61 0.2184 0.0420 0.3115 2.9 1uqu-a1-m2-cB_1uqu-a1-m1-cA
9 1uqt-a1-m1-cA 452 61 0.2184 0.0420 0.3115 2.9 1uqt-a1-m1-cB_1uqt-a1-m1-cA
10 1uqu-a1-m2-cB 449 61 0.2184 0.0423 0.3115 2.9 1uqu-a1-m2-cB_1uqu-a1-m1-cA
11 8c0e-a1-m1-cH 277 55 0.1954 0.0614 0.3091 7.0 8c0e-a1-m1-cH_8c0e-a1-m1-cG
12 7f73-a1-m1-cB 293 61 0.2069 0.0614 0.2951 9.9 7f73-a1-m1-cA_7f73-a1-m1-cB
13 7f73-a1-m1-cA 293 61 0.2069 0.0614 0.2951 9.9 7f73-a1-m1-cA_7f73-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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