Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=53)
FSRSQVLELERRFLRQKYLASAERAALAKALRMTDAQVKTWFQNRRTKWRRQT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3a03-a2-m2-cA 53 53 1.0000 1.0000 1.0000 1.36e-31 3a03-a2-m1-cA_3a03-a2-m2-cA
2 3a03-a2-m1-cA 53 53 1.0000 1.0000 1.0000 1.36e-31 3a03-a2-m1-cA_3a03-a2-m2-cA
3 3cmy-a1-m2-cA 60 52 0.4340 0.3833 0.4423 1.70e-08 3cmy-a1-m1-cA_3cmy-a1-m2-cA
4 3cmy-a1-m1-cA 60 52 0.4340 0.3833 0.4423 1.70e-08 3cmy-a1-m1-cA_3cmy-a1-m2-cA
5 1fjl-a2-m2-cC 59 51 0.4340 0.3898 0.4510 1.15e-07 1fjl-a2-m1-cC_1fjl-a2-m2-cC
6 1fjl-a2-m1-cC 59 51 0.4340 0.3898 0.4510 1.15e-07 1fjl-a2-m1-cC_1fjl-a2-m2-cC
7 7dw5-a1-m1-cB 131 40 0.3019 0.1221 0.4000 0.001 7dw5-a1-m1-cA_7dw5-a1-m1-cB
8 7dw5-a1-m1-cB 131 45 0.2830 0.1145 0.3333 0.012 7dw5-a1-m1-cA_7dw5-a1-m1-cB
9 7dw5-a1-m1-cA 131 40 0.3019 0.1221 0.4000 0.001 7dw5-a1-m1-cA_7dw5-a1-m1-cB
10 7dw5-a1-m1-cA 131 45 0.2830 0.1145 0.3333 0.012 7dw5-a1-m1-cA_7dw5-a1-m1-cB
11 1hf0-a1-m1-cB 128 43 0.3019 0.1250 0.3721 0.005 1hf0-a1-m1-cA_1hf0-a1-m1-cB
12 1hf0-a1-m1-cA 128 43 0.3019 0.1250 0.3721 0.005 1hf0-a1-m1-cA_1hf0-a1-m1-cB
13 1e3o-a1-m2-cC 132 43 0.2642 0.1061 0.3256 0.020 1e3o-a1-m1-cC_1e3o-a1-m2-cC
14 1e3o-a1-m1-cC 132 43 0.2642 0.1061 0.3256 0.020 1e3o-a1-m1-cC_1e3o-a1-m2-cC
15 3nau-a1-m1-cB 56 50 0.2264 0.2143 0.2400 0.16 3nau-a1-m1-cA_3nau-a1-m1-cB
16 3nau-a1-m1-cA 56 50 0.2264 0.2143 0.2400 0.16 3nau-a1-m1-cA_3nau-a1-m1-cB
17 1au7-a1-m1-cA 130 43 0.2830 0.1154 0.3488 0.35 1au7-a1-m1-cB_1au7-a1-m1-cA
18 1au7-a1-m1-cB 128 43 0.2830 0.1172 0.3488 0.36 1au7-a1-m1-cB_1au7-a1-m1-cA
19 3l1p-a1-m1-cA 147 43 0.2642 0.0952 0.3256 1.1 3l1p-a1-m1-cB_3l1p-a1-m1-cA
20 3l1p-a1-m1-cB 145 43 0.2642 0.0966 0.3256 1.2 3l1p-a1-m1-cB_3l1p-a1-m1-cA
21 6fqq-a1-m1-cB 61 29 0.1887 0.1639 0.3448 5.8 6fqq-a1-m1-cB_6fqq-a1-m1-cD
22 3d1n-a1-m1-cL 141 43 0.2264 0.0851 0.2791 6.7 3d1n-a1-m1-cL_3d1n-a1-m1-cK
23 3d1n-a1-m1-cK 146 43 0.2264 0.0822 0.2791 6.8 3d1n-a1-m1-cL_3d1n-a1-m1-cK
24 6fqq-a1-m1-cD 63 29 0.1887 0.1587 0.3448 7.8 6fqq-a1-m1-cB_6fqq-a1-m1-cD

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600