HomodimerDB

Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB

>protein (length=80)
FTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNKDCLIDKRQRNRCQY
CRYQKCLAMGMKREAVQEER

#	Hit	Hit length	Aligned length	Identity (normalized by query)	Identity (normalized by hit)	Identity (normalized by aligned length)	E-value	Dimers
1	6fbq-a1-m1-cA	80	80	1.0000	1.0000	1.0000	1.11e-54	6fbq-a1-m1-cA_6fbq-a1-m1-cB
2	6fbq-a1-m1-cB	81	79	0.9875	0.9753	1.0000	1.10e-53	6fbq-a1-m1-cA_6fbq-a1-m1-cB
3	7xv6-a1-m1-cA	84	75	0.6500	0.6190	0.6933	4.01e-37	7xv6-a1-m1-cB_7xv6-a1-m1-cA
4	7xv6-a1-m1-cB	77	73	0.6250	0.6494	0.6849	9.24e-36	7xv6-a1-m1-cB_7xv6-a1-m1-cA
5	7xv9-a1-m1-cB	80	73	0.6250	0.6250	0.6849	9.32e-36	7xv9-a1-m1-cA_7xv9-a1-m1-cB
6	7xv9-a1-m1-cA	80	73	0.6250	0.6250	0.6849	9.32e-36	7xv9-a1-m1-cA_7xv9-a1-m1-cB
7	6l6l-a1-m1-cA	85	75	0.5875	0.5529	0.6267	3.81e-32	6l6l-a1-m1-cB_6l6l-a1-m1-cA
8	6l6l-a1-m1-cB	84	75	0.5875	0.5595	0.6267	4.66e-32	6l6l-a1-m1-cB_6l6l-a1-m1-cA
9	8ifo-a1-m1-cB	80	79	0.5000	0.5000	0.5063	1.95e-25	8ifo-a1-m1-cA_8ifo-a1-m1-cB
10	8ifo-a1-m1-cA	76	75	0.4875	0.5132	0.5200	8.88e-25	8ifo-a1-m1-cA_8ifo-a1-m1-cB
11	4oln-a1-m1-cA	70	70	0.4750	0.5429	0.5429	1.19e-22	4oln-a1-m1-cB_4oln-a1-m1-cA
12	4oln-a1-m1-cB	67	69	0.4625	0.5522	0.5362	1.63e-21	4oln-a1-m1-cB_4oln-a1-m1-cA
13	1hcq-a2-m1-cE	74	68	0.4375	0.4730	0.5147	2.12e-20	1hcq-a2-m1-cF_1hcq-a2-m1-cE
14	1hcq-a2-m1-cF	71	68	0.4500	0.5070	0.5294	5.44e-20	1hcq-a2-m1-cF_1hcq-a2-m1-cE
15	2c7a-a1-m1-cB	76	70	0.4125	0.4342	0.4714	2.21e-17	2c7a-a1-m1-cB_2c7a-a1-m1-cA
16	2c7a-a1-m1-cA	78	70	0.4125	0.4231	0.4714	2.65e-17	2c7a-a1-m1-cB_2c7a-a1-m1-cA
17	1r4i-a1-m1-cA	74	74	0.4125	0.4459	0.4459	2.60e-16	1r4i-a1-m1-cB_1r4i-a1-m1-cA
18	1r4i-a1-m1-cB	71	66	0.4000	0.4507	0.4848	3.70e-16	1r4i-a1-m1-cB_1r4i-a1-m1-cA
19	2aus-a5-m3-cB	53	36	0.1250	0.1887	0.2778	0.85	2aus-a5-m1-cB_2aus-a5-m3-cB
20	2aus-a5-m1-cB	53	36	0.1250	0.1887	0.2778	0.85	2aus-a5-m1-cB_2aus-a5-m3-cB
21	2aus-a1-m2-cD	53	36	0.1250	0.1887	0.2778	0.85	2aus-a1-m1-cD_2aus-a1-m2-cD
22	2aus-a1-m1-cD	53	36	0.1250	0.1887	0.2778	0.85	2aus-a1-m1-cD_2aus-a1-m2-cD
23	2ey4-a3-m2-cF	52	36	0.1125	0.1731	0.2500	1.6	2ey4-a3-m1-cE_2ey4-a3-m2-cF
24	2ey4-a3-m1-cE	52	36	0.1125	0.1731	0.2500	1.6	2ey4-a3-m1-cE_2ey4-a3-m2-cF
25	4u77-a1-m2-cA	121	29	0.1375	0.0909	0.3793	2.5	4u77-a1-m1-cA_4u77-a1-m2-cA
26	4u77-a1-m1-cA	121	29	0.1375	0.0909	0.3793	2.5	4u77-a1-m1-cA_4u77-a1-m2-cA
27	3mw6-a4-m1-cF	113	40	0.1750	0.1239	0.3500	7.6	3mw6-a4-m1-cF_3mw6-a4-m1-cE
28	3mw6-a3-m3-cF	113	40	0.1750	0.1239	0.3500	7.6	3mw6-a3-m3-cF_3mw6-a3-m1-cD, 3mw6-a3-m3-cF_3mw6-a3-m2-cE
29	3mw6-a3-m1-cD	115	40	0.1750	0.1217	0.3500	7.8	3mw6-a3-m1-cD_3mw6-a3-m2-cE, 3mw6-a3-m3-cF_3mw6-a3-m1-cD
30	3mw6-a4-m1-cE	116	40	0.1750	0.1207	0.3500	8.5	3mw6-a4-m1-cF_3mw6-a4-m1-cE
31	3mw6-a3-m2-cE	116	40	0.1750	0.1207	0.3500	8.5	3mw6-a3-m1-cD_3mw6-a3-m2-cE, 3mw6-a3-m3-cF_3mw6-a3-m2-cE
32	1twf-a2-m2-cB	1094	28	0.1250	0.0091	0.3571	9.3	1twf-a2-m1-cB_1twf-a2-m2-cB
33	1twf-a2-m1-cB	1094	28	0.1250	0.0091	0.3571	9.3	1twf-a2-m1-cB_1twf-a2-m2-cB
34	7uro-a1-m1-cC	1160	21	0.1375	0.0095	0.5238	9.5	7uro-a1-m1-cA_7uro-a1-m1-cC
35	7uro-a1-m1-cA	1160	21	0.1375	0.0095	0.5238	9.5	7uro-a1-m1-cA_7uro-a1-m1-cC

[Back]

Reference:
Jacob Schwartz et al.