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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=51)
FTPNEIKNKEFSRVKNGLEPTEVANFLEQLSTEIERLKEDKKQLEKVIEER

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7o39-a1-m1-cB 51 51 1.0000 1.0000 1.0000 9.78e-30 7o39-a1-m1-cA_7o39-a1-m1-cB
2 7o39-a1-m1-cA 51 51 1.0000 1.0000 1.0000 9.78e-30 7o39-a1-m1-cA_7o39-a1-m1-cB
3 2wuj-a1-m1-cB 50 50 0.3529 0.3600 0.3600 0.001 2wuj-a1-m1-cA_2wuj-a1-m1-cB
4 2wuj-a1-m1-cA 50 50 0.3529 0.3600 0.3600 0.001 2wuj-a1-m1-cA_2wuj-a1-m1-cB
5 6lfa-a1-m2-cA 70 53 0.3529 0.2571 0.3396 0.21 6lfa-a1-m1-cA_6lfa-a1-m2-cA, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
6 6lfa-a1-m1-cA 70 53 0.3529 0.2571 0.3396 0.21 6lfa-a1-m1-cA_6lfa-a1-m2-cA
7 6lfa-a1-m2-cB 62 53 0.3529 0.2903 0.3396 0.23 6lfa-a1-m1-cB_6lfa-a1-m2-cB, 6lfa-a1-m2-cB_6lfa-a1-m2-cA
8 6lfa-a1-m1-cB 62 53 0.3529 0.2903 0.3396 0.23 6lfa-a1-m1-cB_6lfa-a1-m2-cB
9 5n77-a1-m1-cB 257 24 0.2353 0.0467 0.5000 3.1 5n77-a1-m1-cA_5n77-a1-m1-cB
10 5n77-a1-m1-cA 257 24 0.2353 0.0467 0.5000 3.1 5n77-a1-m1-cA_5n77-a1-m1-cB
11 5ekd-a1-m1-cB 327 20 0.2157 0.0336 0.5500 3.7 5ekd-a1-m1-cA_5ekd-a1-m1-cB
12 5ekd-a1-m1-cA 327 20 0.2157 0.0336 0.5500 3.8 5ekd-a1-m1-cA_5ekd-a1-m1-cB
13 3kw3-a1-m1-cA 343 21 0.1961 0.0292 0.4762 4.0 3kw3-a1-m1-cA_3kw3-a1-m1-cB
14 3kw3-a1-m1-cB 358 21 0.1961 0.0279 0.4762 4.1 3kw3-a1-m1-cA_3kw3-a1-m1-cB
15 3syy-a1-m3-cA 194 24 0.2353 0.0619 0.5000 7.7 3syy-a1-m2-cA_3syy-a1-m3-cA
16 3syy-a1-m2-cA 194 24 0.2353 0.0619 0.5000 7.7 3syy-a1-m2-cA_3syy-a1-m3-cA
17 1zke-a4-m3-cD 83 22 0.2353 0.1446 0.5455 8.2 1zke-a4-m1-cC_1zke-a4-m3-cD
18 1zke-a4-m2-cF 83 22 0.2353 0.1446 0.5455 8.2 1zke-a4-m2-cB_1zke-a4-m2-cF
19 1zke-a4-m2-cB 82 22 0.2353 0.1463 0.5455 8.7 1zke-a4-m2-cB_1zke-a4-m2-cF
20 1zke-a4-m1-cC 81 22 0.2353 0.1481 0.5455 8.9 1zke-a4-m1-cC_1zke-a4-m3-cD
21 2dvn-a1-m1-cB 186 24 0.1961 0.0538 0.4167 9.5 2dvn-a1-m1-cA_2dvn-a1-m1-cB
22 2dvn-a1-m1-cA 186 24 0.1961 0.0538 0.4167 9.5 2dvn-a1-m1-cA_2dvn-a1-m1-cB
23 1v7r-a1-m2-cA 186 24 0.1961 0.0538 0.4167 9.5 1v7r-a1-m1-cA_1v7r-a1-m2-cA
24 1v7r-a1-m1-cA 186 24 0.1961 0.0538 0.4167 9.5 1v7r-a1-m1-cA_1v7r-a1-m2-cA
25 2zti-a1-m2-cA 184 24 0.1961 0.0543 0.4167 9.8 2zti-a1-m1-cA_2zti-a1-m2-cA
26 2zti-a1-m1-cA 184 24 0.1961 0.0543 0.4167 9.8 2zti-a1-m1-cA_2zti-a1-m2-cA
27 2dvp-a1-m2-cA 184 24 0.1961 0.0543 0.4167 9.8 2dvp-a1-m1-cA_2dvp-a1-m2-cA
28 2dvp-a1-m1-cA 184 24 0.1961 0.0543 0.4167 9.8 2dvp-a1-m1-cA_2dvp-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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