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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=55)
FTSFVLMLLFTGIILIATNELTYNRPREIQYRYLPRDLDSFIRTQEMPSAIFSSM

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8h2i-a1-m5-ccl 55 55 1.0000 1.0000 1.0000 7.95e-35 8h2i-a1-m5-ccl_8h2i-a1-m5-ccm
2 8h2i-a1-m5-ccm 63 54 0.9818 0.8571 1.0000 5.42e-34 8h2i-a1-m5-ccl_8h2i-a1-m5-ccm
3 5twx-a5-m1-cB 111 40 0.1818 0.0901 0.2500 3.3 5twx-a5-m1-cD_5twx-a5-m1-cB
4 2qe8-a2-m2-cB 332 41 0.2909 0.0482 0.3902 4.0 2qe8-a2-m2-cB_2qe8-a2-m1-cA, 2qe8-a2-m2-cB_2qe8-a2-m2-cA
5 2qe8-a2-m2-cA 333 41 0.2909 0.0480 0.3902 4.0 2qe8-a2-m2-cB_2qe8-a2-m2-cA
6 2qe8-a2-m1-cA 333 41 0.2909 0.0480 0.3902 4.0 2qe8-a2-m2-cB_2qe8-a2-m1-cA
7 5twx-a5-m1-cD 109 39 0.1818 0.0917 0.2564 4.1 5twx-a5-m1-cD_5twx-a5-m1-cB
8 3dwc-a2-m1-cC 500 46 0.3091 0.0340 0.3696 4.8 3dwc-a2-m1-cD_3dwc-a2-m1-cC
9 6v0q-a5-m1-cD 117 29 0.1818 0.0855 0.3448 5.2 6v0q-a5-m1-cD_6v0q-a5-m1-cA
10 3dwc-a2-m1-cD 482 46 0.3091 0.0353 0.3696 5.3 3dwc-a2-m1-cD_3dwc-a2-m1-cC
11 6v17-a3-m2-cB 119 29 0.1818 0.0840 0.3448 5.9 6v17-a3-m1-cA_6v17-a3-m2-cB
12 6v17-a3-m1-cA 119 29 0.1818 0.0840 0.3448 5.9 6v17-a3-m1-cA_6v17-a3-m2-cB
13 6v0q-a5-m1-cA 119 29 0.1818 0.0840 0.3448 5.9 6v0q-a5-m1-cD_6v0q-a5-m1-cA
14 7kfr-a1-m9-cA 521 28 0.2000 0.0211 0.3929 6.2 7kfr-a1-m54-cA_7kfr-a1-m9-cA, 7kfr-a1-m55-cA_7kfr-a1-m9-cA, 7kfr-a1-m8-cA_7kfr-a1-m9-cA
15 7kfr-a1-m8-cA 521 28 0.2000 0.0211 0.3929 6.2 7kfr-a1-m8-cA_7kfr-a1-m9-cA
16 7kfr-a1-m55-cA 521 28 0.2000 0.0211 0.3929 6.2 7kfr-a1-m55-cA_7kfr-a1-m9-cA
17 7kfr-a1-m54-cA 521 28 0.2000 0.0211 0.3929 6.2 7kfr-a1-m54-cA_7kfr-a1-m9-cA
18 5igm-a1-m1-cA 113 18 0.1455 0.0708 0.4444 6.5 5igm-a1-m1-cB_5igm-a1-m1-cA
19 5e9v-a1-m1-cB 113 18 0.1455 0.0708 0.4444 6.5 5e9v-a1-m1-cA_5e9v-a1-m1-cB
20 5e9v-a1-m1-cA 113 18 0.1455 0.0708 0.4444 6.5 5e9v-a1-m1-cA_5e9v-a1-m1-cB
21 5igm-a1-m1-cB 112 18 0.1455 0.0714 0.4444 6.6 5igm-a1-m1-cB_5igm-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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