Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
FVNQHLCGSHLVEALYLVCGERGFFYTKGIVEQCCTSICSLYQLENYCN

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 7jp3-a1-m1-cE 49 49 1.0000 1.0000 1.0000 1.28e-30 7jp3-a1-m1-cB_7jp3-a1-m1-cE
2 7jp3-a1-m1-cB 49 49 1.0000 1.0000 1.0000 1.28e-30 7jp3-a1-m1-cB_7jp3-a1-m1-cE
3 1zei-a1-m1-cF 53 53 1.0000 0.9245 0.9245 1.14e-28 1zei-a1-m1-cE_1zei-a1-m1-cF
4 1zei-a1-m1-cE 53 53 1.0000 0.9245 0.9245 1.14e-28 1zei-a1-m1-cE_1zei-a1-m1-cF
5 5wdm-a1-m1-cB 46 46 0.8776 0.9348 0.9348 2.30e-25 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cB
6 5wdm-a1-m1-cE 47 47 0.8776 0.9149 0.9149 6.34e-24 5wdm-a1-m1-cD_5wdm-a1-m1-cE, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
7 5wdm-a1-m1-cD 47 47 0.8776 0.9149 0.9149 6.34e-24 5wdm-a1-m1-cC_5wdm-a1-m1-cD, 5wdm-a1-m1-cD_5wdm-a1-m1-cE
8 5wdm-a1-m1-cA 45 46 0.8776 0.9556 0.9348 2.27e-23 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cA
9 5wdm-a1-m1-cF 44 45 0.8571 0.9545 0.9333 1.50e-22 5wdm-a1-m1-cF_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
10 5wdm-a1-m1-cC 44 45 0.8571 0.9545 0.9333 1.50e-22 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cC_5wdm-a1-m1-cD
11 7ins-a9-m2-cF 30 28 0.5510 0.9000 0.9643 2.59e-14 7ins-a9-m1-cD_7ins-a9-m2-cF
12 7ins-a9-m1-cD 30 28 0.5510 0.9000 0.9643 2.59e-14 7ins-a9-m1-cD_7ins-a9-m2-cF
13 8gsg-a1-m3-cD 30 28 0.5510 0.9000 0.9643 2.96e-14 8gsg-a1-m2-cB_8gsg-a1-m3-cD
14 8gsg-a1-m2-cB 30 28 0.5510 0.9000 0.9643 2.96e-14 8gsg-a1-m2-cB_8gsg-a1-m3-cD
15 5aiy-a1-m1-cL 30 28 0.5510 0.9000 0.9643 2.96e-14 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
16 5aiy-a1-m1-cJ 30 28 0.5510 0.9000 0.9643 2.96e-14 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
17 4f51-a1-m3-cD 30 28 0.5510 0.9000 0.9643 2.96e-14 4f51-a1-m2-cB_4f51-a1-m3-cD
18 4f51-a1-m2-cD 30 28 0.5510 0.9000 0.9643 2.96e-14 4f51-a1-m2-cB_4f51-a1-m2-cD
19 4f51-a1-m2-cB 30 28 0.5510 0.9000 0.9643 2.96e-14 4f51-a1-m2-cB_4f51-a1-m2-cD, 4f51-a1-m2-cB_4f51-a1-m3-cD
20 4aiy-a1-m1-cL 30 28 0.5510 0.9000 0.9643 2.96e-14 4aiy-a1-m1-cF_4aiy-a1-m1-cL
21 4aiy-a1-m1-cF 30 28 0.5510 0.9000 0.9643 2.96e-14 4aiy-a1-m1-cF_4aiy-a1-m1-cL
22 3fq9-a5-m3-cD 30 28 0.5510 0.9000 0.9643 2.96e-14 3fq9-a5-m2-cB_3fq9-a5-m3-cD
23 3fq9-a5-m2-cB 30 28 0.5510 0.9000 0.9643 2.96e-14 3fq9-a5-m2-cB_3fq9-a5-m3-cD
24 2aiy-a1-m1-cL 30 28 0.5510 0.9000 0.9643 2.96e-14 2aiy-a1-m1-cH_2aiy-a1-m1-cL
25 2aiy-a1-m1-cH 30 28 0.5510 0.9000 0.9643 2.96e-14 2aiy-a1-m1-cH_2aiy-a1-m1-cL
26 1rwe-a3-m3-cD 30 28 0.5510 0.9000 0.9643 2.96e-14 1rwe-a3-m2-cD_1rwe-a3-m3-cD
27 1rwe-a3-m2-cD 30 28 0.5510 0.9000 0.9643 2.96e-14 1rwe-a3-m2-cD_1rwe-a3-m3-cD
28 1ben-a9-m3-cB 30 28 0.5510 0.9000 0.9643 2.96e-14 1ben-a9-m3-cD_1ben-a9-m3-cB
29 1ben-a9-m1-cB 30 28 0.5510 0.9000 0.9643 2.96e-14 1ben-a9-m3-cD_1ben-a9-m1-cB
30 1aiy-a1-m1-cL 30 28 0.5510 0.9000 0.9643 2.96e-14 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
31 1aiy-a1-m1-cJ 30 28 0.5510 0.9000 0.9643 2.96e-14 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
32 1ben-a9-m3-cD 28 28 0.5510 0.9643 0.9643 3.57e-14 1ben-a9-m3-cD_1ben-a9-m1-cB, 1ben-a9-m3-cD_1ben-a9-m3-cB
33 1htv-a1-m1-cL 27 27 0.5510 1.0000 1.0000 5.54e-14 1htv-a1-m1-cF_1htv-a1-m1-cL
34 1htv-a1-m1-cF 27 27 0.5510 1.0000 1.0000 5.54e-14 1htv-a1-m1-cF_1htv-a1-m1-cL
35 1htv-a1-m1-cD 27 27 0.5510 1.0000 1.0000 5.54e-14 1htv-a1-m1-cB_1htv-a1-m1-cD
36 1htv-a1-m1-cB 27 27 0.5510 1.0000 1.0000 5.54e-14 1htv-a1-m1-cB_1htv-a1-m1-cD
37 4une-a3-m1-cB 30 28 0.5306 0.8667 0.9286 8.69e-14 4une-a3-m2-cD_4une-a3-m1-cB
38 4une-a3-m2-cD 29 28 0.5306 0.8966 0.9286 1.00e-13 4une-a3-m2-cD_4une-a3-m1-cB
39 5mam-a4-m3-c5 28 27 0.5306 0.9286 0.9630 2.07e-13 5mam-a4-m3-c3_5mam-a4-m3-c5
40 6s4j-a1-m3-cB 28 28 0.5306 0.9286 0.9286 4.04e-13 6s4j-a1-m2-cB_6s4j-a1-m3-cB
41 6s4j-a1-m2-cB 28 28 0.5306 0.9286 0.9286 4.04e-13 6s4j-a1-m2-cB_6s4j-a1-m3-cB
42 3zs2-a1-m1-cJ 28 28 0.5510 0.9643 0.9643 2.76e-12 3zs2-a1-m1-cB_3zs2-a1-m1-cJ, 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
43 3zs2-a1-m1-cH 26 25 0.4898 0.9231 0.9600 6.89e-12 3zs2-a1-m1-cF_3zs2-a1-m1-cH
44 3zs2-a1-m1-cB 26 25 0.4898 0.9231 0.9600 6.89e-12 3zs2-a1-m1-cB_3zs2-a1-m1-cJ
45 3zs2-a1-m1-cL 25 25 0.4898 0.9600 0.9600 8.71e-12 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
46 2wru-a1-m2-cB 24 24 0.4898 1.0000 1.0000 1.71e-11 2wru-a1-m1-cB_2wru-a1-m2-cB
47 2wru-a1-m1-cB 24 24 0.4898 1.0000 1.0000 1.71e-11 2wru-a1-m1-cB_2wru-a1-m2-cB
48 5mam-a4-m3-c3 24 24 0.4694 0.9583 0.9583 5.72e-11 5mam-a4-m3-c3_5mam-a4-m3-c5
49 3zs2-a1-m1-cF 24 24 0.4694 0.9583 0.9583 5.72e-11 3zs2-a1-m1-cF_3zs2-a1-m1-cH
50 1dei-a3-m1-cD 23 23 0.4694 1.0000 1.0000 1.26e-10 1dei-a3-m1-cB_1dei-a3-m1-cD
51 1dei-a3-m1-cB 23 23 0.4694 1.0000 1.0000 1.26e-10 1dei-a3-m1-cB_1dei-a3-m1-cD
52 5bpo-a1-m1-cC 21 21 0.4286 1.0000 1.0000 1.12e-08 5bpo-a1-m1-cA_5bpo-a1-m1-cC
53 5bpo-a1-m1-cA 21 21 0.4286 1.0000 1.0000 1.12e-08 5bpo-a1-m1-cA_5bpo-a1-m1-cC
54 4cy7-a2-m3-cA 21 21 0.4286 1.0000 1.0000 1.12e-08 4cy7-a2-m1-cC_4cy7-a2-m3-cA
55 4cy7-a2-m1-cC 21 21 0.4286 1.0000 1.0000 1.12e-08 4cy7-a2-m1-cC_4cy7-a2-m3-cA
56 2wrx-a1-m1-cC 21 21 0.4286 1.0000 1.0000 1.12e-08 2wrx-a1-m1-cA_2wrx-a1-m1-cC
57 2wrx-a1-m1-cA 21 21 0.4286 1.0000 1.0000 1.12e-08 2wrx-a1-m1-cA_2wrx-a1-m1-cC
58 1xw7-a4-m5-cA 21 21 0.4082 0.9524 0.9524 3.37e-08 1xw7-a4-m4-cA_1xw7-a4-m5-cA
59 1xw7-a4-m4-cA 21 21 0.4082 0.9524 0.9524 3.37e-08 1xw7-a4-m4-cA_1xw7-a4-m5-cA
60 1bph-a4-m3-cA 21 21 0.3878 0.9048 0.9048 7.42e-08 1bph-a4-m1-cA_1bph-a4-m3-cA
61 1bph-a4-m1-cA 21 21 0.3878 0.9048 0.9048 7.42e-08 1bph-a4-m1-cA_1bph-a4-m3-cA
62 8ed3-a1-m1-cx 201 28 0.1837 0.0448 0.3214 3.4 8ed3-a1-m1-cV_8ed3-a1-m1-cx
63 8ed3-a1-m1-cV 201 28 0.1837 0.0448 0.3214 3.4 8ed3-a1-m1-cV_8ed3-a1-m1-cx
64 1wa3-a1-m1-cB 202 28 0.1837 0.0446 0.3214 3.4 1wa3-a1-m1-cA_1wa3-a1-m1-cB
65 1wa3-a1-m1-cA 202 28 0.1837 0.0446 0.3214 3.4 1wa3-a1-m1-cA_1wa3-a1-m1-cB

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600