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HomodimerDB
>protein (length=30)
FVNQHLCGSHLVEALYLVCGERGFFYTPKT

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 8gsg-a1-m3-cD 30 30 1.0000 1.0000 1.0000 3.51e-17 8gsg-a1-m2-cB_8gsg-a1-m3-cD
2 8gsg-a1-m2-cB 30 30 1.0000 1.0000 1.0000 3.51e-17 8gsg-a1-m2-cB_8gsg-a1-m3-cD
3 5aiy-a1-m1-cL 30 30 1.0000 1.0000 1.0000 3.51e-17 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
4 5aiy-a1-m1-cJ 30 30 1.0000 1.0000 1.0000 3.51e-17 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
5 4f51-a1-m3-cD 30 30 1.0000 1.0000 1.0000 3.51e-17 4f51-a1-m2-cB_4f51-a1-m3-cD
6 4f51-a1-m2-cD 30 30 1.0000 1.0000 1.0000 3.51e-17 4f51-a1-m2-cB_4f51-a1-m2-cD
7 4f51-a1-m2-cB 30 30 1.0000 1.0000 1.0000 3.51e-17 4f51-a1-m2-cB_4f51-a1-m2-cD, 4f51-a1-m2-cB_4f51-a1-m3-cD
8 4aiy-a1-m1-cL 30 30 1.0000 1.0000 1.0000 3.51e-17 4aiy-a1-m1-cF_4aiy-a1-m1-cL
9 4aiy-a1-m1-cF 30 30 1.0000 1.0000 1.0000 3.51e-17 4aiy-a1-m1-cF_4aiy-a1-m1-cL
10 3fq9-a5-m3-cD 30 30 1.0000 1.0000 1.0000 3.51e-17 3fq9-a5-m2-cB_3fq9-a5-m3-cD
11 3fq9-a5-m2-cB 30 30 1.0000 1.0000 1.0000 3.51e-17 3fq9-a5-m2-cB_3fq9-a5-m3-cD
12 2aiy-a1-m1-cL 30 30 1.0000 1.0000 1.0000 3.51e-17 2aiy-a1-m1-cH_2aiy-a1-m1-cL
13 2aiy-a1-m1-cH 30 30 1.0000 1.0000 1.0000 3.51e-17 2aiy-a1-m1-cH_2aiy-a1-m1-cL
14 1rwe-a3-m3-cD 30 30 1.0000 1.0000 1.0000 3.51e-17 1rwe-a3-m2-cD_1rwe-a3-m3-cD
15 1rwe-a3-m2-cD 30 30 1.0000 1.0000 1.0000 3.51e-17 1rwe-a3-m2-cD_1rwe-a3-m3-cD
16 1ben-a9-m3-cB 30 30 1.0000 1.0000 1.0000 3.51e-17 1ben-a9-m3-cD_1ben-a9-m3-cB
17 1ben-a9-m1-cB 30 30 1.0000 1.0000 1.0000 3.51e-17 1ben-a9-m3-cD_1ben-a9-m1-cB
18 1aiy-a1-m1-cL 30 30 1.0000 1.0000 1.0000 3.51e-17 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
19 1aiy-a1-m1-cJ 30 30 1.0000 1.0000 1.0000 3.51e-17 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
20 4une-a3-m1-cB 30 30 0.9667 0.9667 0.9667 1.15e-16 4une-a3-m2-cD_4une-a3-m1-cB
21 7ins-a9-m2-cF 30 30 0.9667 0.9667 0.9667 1.47e-16 7ins-a9-m1-cD_7ins-a9-m2-cF
22 7ins-a9-m1-cD 30 30 0.9667 0.9667 0.9667 1.47e-16 7ins-a9-m1-cD_7ins-a9-m2-cF
23 4une-a3-m2-cD 29 29 0.9333 0.9655 0.9655 6.90e-16 4une-a3-m2-cD_4une-a3-m1-cB
24 5mam-a4-m3-c5 28 28 0.9333 1.0000 1.0000 1.16e-15 5mam-a4-m3-c3_5mam-a4-m3-c5
25 1ben-a9-m3-cD 28 28 0.9333 1.0000 1.0000 1.38e-15 1ben-a9-m3-cD_1ben-a9-m1-cB, 1ben-a9-m3-cD_1ben-a9-m3-cB
26 1zei-a1-m1-cF 53 30 0.9333 0.5283 0.9333 1.77e-15 1zei-a1-m1-cE_1zei-a1-m1-cF
27 1zei-a1-m1-cE 53 30 0.9333 0.5283 0.9333 1.77e-15 1zei-a1-m1-cE_1zei-a1-m1-cF
28 7jp3-a1-m1-cE 49 28 0.9000 0.5510 0.9643 1.81e-14 7jp3-a1-m1-cB_7jp3-a1-m1-cE
29 7jp3-a1-m1-cB 49 28 0.9000 0.5510 0.9643 1.81e-14 7jp3-a1-m1-cB_7jp3-a1-m1-cE
30 1htv-a1-m1-cL 27 27 0.9000 1.0000 1.0000 1.95e-14 1htv-a1-m1-cF_1htv-a1-m1-cL
31 1htv-a1-m1-cF 27 27 0.9000 1.0000 1.0000 1.95e-14 1htv-a1-m1-cF_1htv-a1-m1-cL
32 1htv-a1-m1-cD 27 27 0.9000 1.0000 1.0000 1.95e-14 1htv-a1-m1-cB_1htv-a1-m1-cD
33 1htv-a1-m1-cB 27 27 0.9000 1.0000 1.0000 1.95e-14 1htv-a1-m1-cB_1htv-a1-m1-cD
34 5wdm-a1-m1-cE 47 26 0.8333 0.5319 0.9615 1.46e-13 5wdm-a1-m1-cD_5wdm-a1-m1-cE, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
35 5wdm-a1-m1-cD 47 26 0.8333 0.5319 0.9615 1.46e-13 5wdm-a1-m1-cC_5wdm-a1-m1-cD, 5wdm-a1-m1-cD_5wdm-a1-m1-cE
36 3zs2-a1-m1-cJ 28 28 0.8333 0.8929 0.8929 2.44e-13 3zs2-a1-m1-cB_3zs2-a1-m1-cJ, 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
37 5wdm-a1-m1-cB 46 25 0.8333 0.5435 1.0000 3.93e-13 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cB
38 6s4j-a1-m3-cB 28 29 0.9000 0.9643 0.9310 9.95e-13 6s4j-a1-m2-cB_6s4j-a1-m3-cB
39 6s4j-a1-m2-cB 28 29 0.9000 0.9643 0.9310 9.95e-13 6s4j-a1-m2-cB_6s4j-a1-m3-cB
40 3zs2-a1-m1-cH 26 25 0.8000 0.9231 0.9600 2.00e-12 3zs2-a1-m1-cF_3zs2-a1-m1-cH
41 3zs2-a1-m1-cB 26 25 0.8000 0.9231 0.9600 2.00e-12 3zs2-a1-m1-cB_3zs2-a1-m1-cJ
42 3zs2-a1-m1-cL 25 25 0.8000 0.9600 0.9600 2.47e-12 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
43 5mam-a4-m3-c3 24 24 0.8000 1.0000 1.0000 2.71e-12 5mam-a4-m3-c3_5mam-a4-m3-c5
44 2wru-a1-m2-cB 24 24 0.8000 1.0000 1.0000 5.53e-12 2wru-a1-m1-cB_2wru-a1-m2-cB
45 2wru-a1-m1-cB 24 24 0.8000 1.0000 1.0000 5.53e-12 2wru-a1-m1-cB_2wru-a1-m2-cB
46 5wdm-a1-m1-cA 45 24 0.8000 0.5333 1.0000 6.21e-12 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cA
47 3zs2-a1-m1-cF 24 24 0.7667 0.9583 0.9583 1.41e-11 3zs2-a1-m1-cF_3zs2-a1-m1-cH
48 1dei-a3-m1-cD 23 23 0.7667 1.0000 1.0000 3.76e-11 1dei-a3-m1-cB_1dei-a3-m1-cD
49 1dei-a3-m1-cB 23 23 0.7667 1.0000 1.0000 3.76e-11 1dei-a3-m1-cB_1dei-a3-m1-cD
50 5wdm-a1-m1-cF 44 23 0.7667 0.5227 1.0000 4.25e-11 5wdm-a1-m1-cF_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
51 5wdm-a1-m1-cC 44 23 0.7667 0.5227 1.0000 4.25e-11 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cC_5wdm-a1-m1-cD
52 1wa3-a1-m1-cB 202 25 0.3000 0.0446 0.3600 1.7 1wa3-a1-m1-cA_1wa3-a1-m1-cB
53 1wa3-a1-m1-cA 202 25 0.3000 0.0446 0.3600 1.7 1wa3-a1-m1-cA_1wa3-a1-m1-cB
54 8ed3-a1-m1-cx 201 25 0.3000 0.0448 0.3600 1.8 8ed3-a1-m1-cV_8ed3-a1-m1-cx
55 8ed3-a1-m1-cV 201 25 0.3000 0.0448 0.3600 1.8 8ed3-a1-m1-cV_8ed3-a1-m1-cx

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Reference:
Jacob Schwartz et al.

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