Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

●I-TASSER ●I-TASSER-MTD ●C-I-TASSER ●CR-I-TASSER ●QUARK ●C-QUARK ●LOMETS ●MUSTER ●CEthreader ●SEGMER ●DeepFold ●DeepFoldRNA ●FoldDesign ●COFACTOR ●COACH ●MetaGO ●TripletGO ●IonCom ●FG-MD ●ModRefiner ●REMO ●DEMO ●DEMO-EM ●SPRING ●COTH ●Threpp ●PEPPI ●BSpred ●ANGLOR ●EDock ●BSP-SLIM ●SAXSTER ●FUpred ●ThreaDom ●ThreaDomEx ●EvoDesign ●BindProf ●BindProfX ●SSIPe ●GPCR-I-TASSER ●MAGELLAN ●ResQ ●STRUM ●DAMpred

●TM-score ●TM-align ●US-align ●MM-align ●RNA-align ●NW-align ●LS-align ●EDTSurf ●MVP ●MVP-Fit ●SPICKER ●HAAD ●PSSpred ●3DRobot ●MR-REX ●I-TASSER-MR ●SVMSEQ ●NeBcon ●ResPRE ●TripletRes ●DeepPotential ●WDL-RF ●ATPbind ●DockRMSD ●DeepMSA ●FASPR ●EM-Refiner ●GPU-I-TASSER

●BioLiP ●E. coli ●GLASS ●GPCR-HGmod ●GPCR-RD ●GPCR-EXP ●Tara-3D ●TM-fold ●DECOYS ●POTENTIAL ●RW/RWplus ●EvoEF ●HPSF ●THE-DB ●ADDRESS ●Alpaca-Antibody ●CASP7 ●CASP8 ●CASP9 ●CASP10 ●CASP11 ●CASP12 ●CASP13 ●CASP14

HomodimerDB
>protein (length=28)
FVNQHLCGSHLVEALYLVCGERGFHYPK

# Hit Hit
length 		Aligned
length 		Identity
(normalized by query) 		Identity
(normalized by hit) 		Identity (normalized
by aligned length) 		E-value Dimers
1 6s4j-a1-m3-cB 28 28 1.0000 1.0000 1.0000 1.81e-15 6s4j-a1-m2-cB_6s4j-a1-m3-cB
2 6s4j-a1-m2-cB 28 28 1.0000 1.0000 1.0000 1.81e-15 6s4j-a1-m2-cB_6s4j-a1-m3-cB
3 7jp3-a1-m1-cE 49 28 0.9286 0.5306 0.9286 2.31e-13 7jp3-a1-m1-cB_7jp3-a1-m1-cE
4 7jp3-a1-m1-cB 49 28 0.9286 0.5306 0.9286 2.31e-13 7jp3-a1-m1-cB_7jp3-a1-m1-cE
5 8gsg-a1-m3-cD 30 29 0.9643 0.9000 0.9310 9.29e-13 8gsg-a1-m2-cB_8gsg-a1-m3-cD
6 8gsg-a1-m2-cB 30 29 0.9643 0.9000 0.9310 9.29e-13 8gsg-a1-m2-cB_8gsg-a1-m3-cD
7 5aiy-a1-m1-cL 30 29 0.9643 0.9000 0.9310 9.29e-13 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
8 5aiy-a1-m1-cJ 30 29 0.9643 0.9000 0.9310 9.29e-13 5aiy-a1-m1-cJ_5aiy-a1-m1-cL
9 4f51-a1-m3-cD 30 29 0.9643 0.9000 0.9310 9.29e-13 4f51-a1-m2-cB_4f51-a1-m3-cD
10 4f51-a1-m2-cD 30 29 0.9643 0.9000 0.9310 9.29e-13 4f51-a1-m2-cB_4f51-a1-m2-cD
11 4f51-a1-m2-cB 30 29 0.9643 0.9000 0.9310 9.29e-13 4f51-a1-m2-cB_4f51-a1-m2-cD, 4f51-a1-m2-cB_4f51-a1-m3-cD
12 4aiy-a1-m1-cL 30 29 0.9643 0.9000 0.9310 9.29e-13 4aiy-a1-m1-cF_4aiy-a1-m1-cL
13 4aiy-a1-m1-cF 30 29 0.9643 0.9000 0.9310 9.29e-13 4aiy-a1-m1-cF_4aiy-a1-m1-cL
14 3fq9-a5-m3-cD 30 29 0.9643 0.9000 0.9310 9.29e-13 3fq9-a5-m2-cB_3fq9-a5-m3-cD
15 3fq9-a5-m2-cB 30 29 0.9643 0.9000 0.9310 9.29e-13 3fq9-a5-m2-cB_3fq9-a5-m3-cD
16 2aiy-a1-m1-cL 30 29 0.9643 0.9000 0.9310 9.29e-13 2aiy-a1-m1-cH_2aiy-a1-m1-cL
17 2aiy-a1-m1-cH 30 29 0.9643 0.9000 0.9310 9.29e-13 2aiy-a1-m1-cH_2aiy-a1-m1-cL
18 1rwe-a3-m3-cD 30 29 0.9643 0.9000 0.9310 9.29e-13 1rwe-a3-m2-cD_1rwe-a3-m3-cD
19 1rwe-a3-m2-cD 30 29 0.9643 0.9000 0.9310 9.29e-13 1rwe-a3-m2-cD_1rwe-a3-m3-cD
20 1ben-a9-m3-cB 30 29 0.9643 0.9000 0.9310 9.29e-13 1ben-a9-m3-cD_1ben-a9-m3-cB
21 1ben-a9-m1-cB 30 29 0.9643 0.9000 0.9310 9.29e-13 1ben-a9-m3-cD_1ben-a9-m1-cB
22 1aiy-a1-m1-cL 30 29 0.9643 0.9000 0.9310 9.29e-13 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
23 1aiy-a1-m1-cJ 30 29 0.9643 0.9000 0.9310 9.29e-13 1aiy-a1-m1-cJ_1aiy-a1-m1-cL
24 7ins-a9-m2-cF 30 29 0.9643 0.9000 0.9310 1.00e-12 7ins-a9-m1-cD_7ins-a9-m2-cF
25 7ins-a9-m1-cD 30 29 0.9643 0.9000 0.9310 1.00e-12 7ins-a9-m1-cD_7ins-a9-m2-cF
26 1zei-a1-m1-cF 53 28 0.8929 0.4717 0.8929 1.01e-12 1zei-a1-m1-cE_1zei-a1-m1-cF
27 1zei-a1-m1-cE 53 28 0.8929 0.4717 0.8929 1.01e-12 1zei-a1-m1-cE_1zei-a1-m1-cF
28 1htv-a1-m1-cL 27 27 0.8929 0.9259 0.9259 1.32e-12 1htv-a1-m1-cF_1htv-a1-m1-cL
29 1htv-a1-m1-cF 27 27 0.8929 0.9259 0.9259 1.32e-12 1htv-a1-m1-cF_1htv-a1-m1-cL
30 1htv-a1-m1-cD 27 27 0.8929 0.9259 0.9259 1.32e-12 1htv-a1-m1-cB_1htv-a1-m1-cD
31 1htv-a1-m1-cB 27 27 0.8929 0.9259 0.9259 1.32e-12 1htv-a1-m1-cB_1htv-a1-m1-cD
32 1ben-a9-m3-cD 28 26 0.8929 0.8929 0.9615 1.77e-12 1ben-a9-m3-cD_1ben-a9-m1-cB, 1ben-a9-m3-cD_1ben-a9-m3-cB
33 4une-a3-m1-cB 30 29 0.9286 0.8667 0.8966 2.64e-12 4une-a3-m2-cD_4une-a3-m1-cB
34 4une-a3-m2-cD 29 29 0.9286 0.8966 0.8966 3.25e-12 4une-a3-m2-cD_4une-a3-m1-cB
35 3zs2-a1-m1-cJ 28 25 0.8571 0.8571 0.9600 4.61e-12 3zs2-a1-m1-cB_3zs2-a1-m1-cJ, 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
36 3zs2-a1-m1-cH 26 25 0.8571 0.9231 0.9600 4.68e-12 3zs2-a1-m1-cF_3zs2-a1-m1-cH
37 3zs2-a1-m1-cB 26 25 0.8571 0.9231 0.9600 4.68e-12 3zs2-a1-m1-cB_3zs2-a1-m1-cJ
38 3zs2-a1-m1-cL 25 25 0.8571 0.9600 0.9600 6.11e-12 3zs2-a1-m1-cL_3zs2-a1-m1-cJ
39 5mam-a4-m3-c5 28 28 0.9286 0.9286 0.9286 8.63e-12 5mam-a4-m3-c3_5mam-a4-m3-c5
40 3zs2-a1-m1-cF 24 24 0.8214 0.9583 0.9583 4.25e-11 3zs2-a1-m1-cF_3zs2-a1-m1-cH
41 2wru-a1-m2-cB 24 23 0.8214 0.9583 1.0000 6.03e-11 2wru-a1-m1-cB_2wru-a1-m2-cB
42 2wru-a1-m1-cB 24 23 0.8214 0.9583 1.0000 6.03e-11 2wru-a1-m1-cB_2wru-a1-m2-cB
43 1dei-a3-m1-cD 23 23 0.8214 1.0000 1.0000 6.07e-11 1dei-a3-m1-cB_1dei-a3-m1-cD
44 1dei-a3-m1-cB 23 23 0.8214 1.0000 1.0000 6.07e-11 1dei-a3-m1-cB_1dei-a3-m1-cD
45 5wdm-a1-m1-cA 45 24 0.7857 0.4889 0.9167 5.71e-10 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cA
46 5wdm-a1-m1-cB 46 24 0.7857 0.4783 0.9167 8.28e-10 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cB
47 5wdm-a1-m1-cE 47 24 0.7857 0.4681 0.9167 8.45e-10 5wdm-a1-m1-cD_5wdm-a1-m1-cE, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
48 5wdm-a1-m1-cD 47 24 0.7857 0.4681 0.9167 8.45e-10 5wdm-a1-m1-cC_5wdm-a1-m1-cD, 5wdm-a1-m1-cD_5wdm-a1-m1-cE
49 5mam-a4-m3-c3 24 22 0.7500 0.8750 0.9545 3.55e-09 5mam-a4-m3-c3_5mam-a4-m3-c5
50 5wdm-a1-m1-cF 44 23 0.7500 0.4773 0.9130 4.00e-09 5wdm-a1-m1-cF_5wdm-a1-m1-cA, 5wdm-a1-m1-cF_5wdm-a1-m1-cB, 5wdm-a1-m1-cF_5wdm-a1-m1-cE
51 5wdm-a1-m1-cC 44 23 0.7500 0.4773 0.9130 4.00e-09 5wdm-a1-m1-cC_5wdm-a1-m1-cA, 5wdm-a1-m1-cC_5wdm-a1-m1-cB, 5wdm-a1-m1-cC_5wdm-a1-m1-cD
52 5cd6-a5-m2-cC 568 17 0.2857 0.0141 0.4706 5.6 5cd6-a5-m1-cC_5cd6-a5-m2-cC
53 5cd6-a5-m1-cC 568 17 0.2857 0.0141 0.4706 5.6 5cd6-a5-m1-cC_5cd6-a5-m2-cC

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600