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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=90)
FYTLNIAEIAERIGNDDCAYQVLAFINENGEAQLNKTAVAEIQLSKPTVFATVNSFYCAG
YIDETRVGRSKIYTLSDLGVEIVECFKQKA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4ass-a1-m1-cC 90 90 1.0000 1.0000 1.0000 1.96e-62 4ass-a1-m1-cB_4ass-a1-m1-cC
2 4ass-a1-m1-cB 90 90 1.0000 1.0000 1.0000 1.96e-62 4ass-a1-m1-cB_4ass-a1-m1-cC
3 3m9a-a1-m2-cA 93 93 1.0000 0.9677 0.9677 2.61e-57 3m9a-a1-m1-cA_3m9a-a1-m2-cA
4 3m9a-a1-m1-cA 93 93 1.0000 0.9677 0.9677 2.61e-57 3m9a-a1-m1-cA_3m9a-a1-m2-cA
5 7kua-a1-m2-cA 149 91 0.2556 0.1544 0.2527 0.033 7kua-a1-m1-cA_7kua-a1-m2-cA
6 7kua-a1-m1-cA 149 91 0.2556 0.1544 0.2527 0.033 7kua-a1-m1-cA_7kua-a1-m2-cA
7 2wxy-a1-m2-cC 419 42 0.1889 0.0406 0.4048 3.4 2wxy-a1-m1-cC_2wxy-a1-m2-cC
8 2wxy-a1-m1-cC 419 42 0.1889 0.0406 0.4048 3.4 2wxy-a1-m1-cC_2wxy-a1-m2-cC
9 6mq9-a6-m2-cC 264 38 0.1333 0.0455 0.3158 6.5 6mq9-a6-m2-cC_6mq9-a6-m1-cB
10 6mq9-a6-m1-cB 267 38 0.1333 0.0449 0.3158 7.2 6mq9-a6-m2-cC_6mq9-a6-m1-cB
11 1zs3-a1-m1-cL 171 65 0.2000 0.1053 0.2769 8.0 1zs3-a1-m1-cE_1zs3-a1-m1-cL, 1zs3-a1-m1-cG_1zs3-a1-m1-cL, 1zs3-a1-m1-cJ_1zs3-a1-m1-cL
12 1zs3-a1-m1-cJ 171 65 0.2000 0.1053 0.2769 8.0 1zs3-a1-m1-cJ_1zs3-a1-m1-cL
13 1zs3-a1-m1-cG 171 65 0.2000 0.1053 0.2769 8.0 1zs3-a1-m1-cG_1zs3-a1-m1-cL
14 1zs3-a1-m1-cE 171 65 0.2000 0.1053 0.2769 8.0 1zs3-a1-m1-cE_1zs3-a1-m1-cL

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Reference:
Jacob Schwartz et al.

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