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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
FYTLNIAEIAERIGNDDCAYQVLMAFINENGEAQMLNKTAVAEMIQLSKPTVFATVNSFY
CAGYIDETRVGRSKIYTLSDLGVEIVECFKQKA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3m9a-a1-m2-cA 93 93 1.0000 1.0000 1.0000 9.91e-66 3m9a-a1-m1-cA_3m9a-a1-m2-cA
2 3m9a-a1-m1-cA 93 93 1.0000 1.0000 1.0000 9.91e-66 3m9a-a1-m1-cA_3m9a-a1-m2-cA
3 4ass-a1-m1-cC 90 93 0.9677 1.0000 0.9677 2.69e-57 4ass-a1-m1-cB_4ass-a1-m1-cC
4 4ass-a1-m1-cB 90 93 0.9677 1.0000 0.9677 2.69e-57 4ass-a1-m1-cB_4ass-a1-m1-cC
5 1y4u-a1-m1-cB 454 82 0.1720 0.0352 0.1951 1.7 1y4u-a1-m1-cB_1y4u-a1-m1-cA
6 2ioq-a2-m3-cB 577 82 0.1720 0.0277 0.1951 1.7 2ioq-a2-m1-cB_2ioq-a2-m3-cB
7 2ioq-a2-m1-cB 577 82 0.1720 0.0277 0.1951 1.7 2ioq-a2-m1-cB_2ioq-a2-m3-cB
8 1y4s-a1-m1-cB 475 82 0.1720 0.0337 0.1951 1.7 1y4s-a1-m1-cA_1y4s-a1-m1-cB
9 1y4s-a1-m1-cA 475 82 0.1720 0.0337 0.1951 1.7 1y4s-a1-m1-cA_1y4s-a1-m1-cB
10 1y4u-a1-m1-cA 472 82 0.1720 0.0339 0.1951 1.8 1y4u-a1-m1-cB_1y4u-a1-m1-cA
11 2iop-a3-m1-cD 604 82 0.1720 0.0265 0.1951 1.9 2iop-a3-m1-cD_2iop-a3-m1-cB, 2iop-a3-m1-cD_2iop-a3-m1-cC
12 2iop-a5-m1-cC 606 82 0.1720 0.0264 0.1951 2.0 2iop-a5-m1-cC_2iop-a5-m1-cB
13 2iop-a3-m1-cC 606 82 0.1720 0.0264 0.1951 2.0 2iop-a3-m1-cD_2iop-a3-m1-cC
14 2iop-a5-m1-cB 615 82 0.1720 0.0260 0.1951 2.0 2iop-a5-m1-cC_2iop-a5-m1-cB
15 2iop-a3-m1-cB 615 82 0.1720 0.0260 0.1951 2.0 2iop-a3-m1-cD_2iop-a3-m1-cB
16 2wxy-a1-m2-cC 419 56 0.2258 0.0501 0.3750 2.3 2wxy-a1-m1-cC_2wxy-a1-m2-cC
17 2wxy-a1-m1-cC 419 56 0.2258 0.0501 0.3750 2.3 2wxy-a1-m1-cC_2wxy-a1-m2-cC
18 4dzh-a1-m2-cA 439 80 0.2366 0.0501 0.2750 5.2 4dzh-a1-m1-cA_4dzh-a1-m2-cA
19 4dzh-a1-m1-cA 439 80 0.2366 0.0501 0.2750 5.2 4dzh-a1-m1-cA_4dzh-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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