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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=72)
GAANKSLSLLSTETSILQDAPACCLPLFKFIDIYEKKYGHKLNVSDLYKLTDTIAIREQG
NGRLVCLLPSNQ

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5yad-a1-m1-cA 72 72 1.0000 1.0000 1.0000 5.21e-49 5yad-a1-m1-cB_5yad-a1-m1-cA
2 5yad-a1-m1-cB 70 70 0.9722 1.0000 1.0000 2.81e-47 5yad-a1-m1-cB_5yad-a1-m1-cA
3 3mc9-a3-m1-cA 161 46 0.1944 0.0870 0.3043 1.1 3mc9-a3-m1-cA_3mc9-a3-m1-cB
4 5whs-a1-m1-cB 712 26 0.1528 0.0154 0.4231 1.5 5whs-a1-m1-cA_5whs-a1-m1-cB
5 5whs-a1-m1-cA 712 26 0.1528 0.0154 0.4231 1.5 5whs-a1-m1-cA_5whs-a1-m1-cB
6 5jhy-a1-m1-cB 734 26 0.1389 0.0136 0.3846 4.0 5jhy-a1-m1-cB_5jhy-a1-m1-cA
7 5jhy-a1-m1-cA 735 26 0.1389 0.0136 0.3846 4.0 5jhy-a1-m1-cB_5jhy-a1-m1-cA
8 7jz6-a1-m1-cD 662 26 0.1250 0.0136 0.3462 5.1 7jz6-a1-m1-cB_7jz6-a1-m1-cD, 7jz6-a1-m1-cC_7jz6-a1-m1-cD
9 7jz6-a1-m1-cC 662 26 0.1250 0.0136 0.3462 5.1 7jz6-a1-m1-cC_7jz6-a1-m1-cD
10 7jz6-a1-m1-cB 662 26 0.1250 0.0136 0.3462 5.1 7jz6-a1-m1-cB_7jz6-a1-m1-cD
11 1itk-a2-m2-cA 707 26 0.1389 0.0141 0.3846 9.1 1itk-a2-m1-cA_1itk-a2-m2-cA
12 1itk-a2-m1-cA 707 26 0.1389 0.0141 0.3846 9.1 1itk-a2-m1-cA_1itk-a2-m2-cA
13 3vlk-a1-m1-cB 714 26 0.1389 0.0140 0.3846 9.1 3vlk-a1-m1-cA_3vlk-a1-m1-cB
14 3vlk-a1-m1-cA 714 26 0.1389 0.0140 0.3846 9.1 3vlk-a1-m1-cA_3vlk-a1-m1-cB
15 3wxo-a1-m2-cA 710 26 0.1528 0.0155 0.4231 9.5 3wxo-a1-m1-cA_3wxo-a1-m2-cA
16 3wxo-a1-m1-cA 710 26 0.1528 0.0155 0.4231 9.5 3wxo-a1-m1-cA_3wxo-a1-m2-cA

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Reference:
Jacob Schwartz et al.

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