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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=83)
GADIDQASKTEEAAAFRHLLRHLDEHKDVQNIDLIQADFCRNCLAKWLEAATEQGVELDY
DGAREYVYGPFAEWKTLYQKPAS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fyb-a1-m1-cA 93 83 1.0000 0.8925 1.0000 8.05e-59 3fyb-a1-m1-cB_3fyb-a1-m1-cA
2 3fyb-a1-m1-cB 83 83 1.0000 1.0000 1.0000 1.46e-58 3fyb-a1-m1-cB_3fyb-a1-m1-cA
3 2o35-a1-m2-cA 76 65 0.4337 0.4737 0.5538 2.99e-20 2o35-a1-m1-cA_2o35-a1-m2-cA, 2o35-a1-m2-cA_2o35-a1-m2-cB
4 2o35-a1-m1-cA 76 65 0.4337 0.4737 0.5538 2.99e-20 2o35-a1-m1-cA_2o35-a1-m2-cA, 2o35-a1-m1-cA_2o35-a1-m2-cB
5 2o35-a1-m2-cB 92 65 0.4337 0.3913 0.5538 3.18e-20 2o35-a1-m1-cA_2o35-a1-m2-cB, 2o35-a1-m1-cB_2o35-a1-m2-cB, 2o35-a1-m2-cA_2o35-a1-m2-cB
6 2o35-a1-m1-cB 92 65 0.4337 0.3913 0.5538 3.18e-20 2o35-a1-m1-cB_2o35-a1-m2-cB
7 7q62-a1-m1-cB 822 41 0.2048 0.0207 0.4146 1.9 7q62-a1-m1-cB_7q62-a1-m1-cA
8 7q62-a1-m1-cA 1223 41 0.2048 0.0139 0.4146 1.9 7q62-a1-m1-cB_7q62-a1-m1-cA
9 3nbu-a3-m1-cF 549 27 0.1446 0.0219 0.4444 3.0 3nbu-a3-m1-cE_3nbu-a3-m1-cF
10 3nbu-a3-m1-cE 549 27 0.1446 0.0219 0.4444 3.0 3nbu-a3-m1-cE_3nbu-a3-m1-cF
11 6an0-a1-m2-cA 433 18 0.0964 0.0185 0.4444 4.6 6an0-a1-m1-cA_6an0-a1-m2-cA
12 6an0-a1-m1-cA 433 18 0.0964 0.0185 0.4444 4.6 6an0-a1-m1-cA_6an0-a1-m2-cA
13 3o4f-a4-m1-cH 264 31 0.1325 0.0417 0.3548 5.3 3o4f-a4-m1-cH_3o4f-a4-m1-cG
14 2ach-a2-m2-cA 337 43 0.1446 0.0356 0.2791 6.2 2ach-a2-m2-cA_2ach-a2-m1-cA
15 2ach-a2-m1-cA 337 43 0.1446 0.0356 0.2791 6.2 2ach-a2-m2-cA_2ach-a2-m1-cA
16 3pj0-a2-m1-cC 349 39 0.2048 0.0487 0.4359 6.8 3pj0-a2-m1-cC_3pj0-a2-m1-cD
17 3pj0-a2-m1-cD 354 39 0.2048 0.0480 0.4359 6.8 3pj0-a2-m1-cC_3pj0-a2-m1-cD
18 3o4f-a4-m1-cG 279 31 0.1325 0.0394 0.3548 8.1 3o4f-a4-m1-cH_3o4f-a4-m1-cG
19 7x2u-a1-m1-cA 541 24 0.1084 0.0166 0.3750 8.6 7x2u-a1-m1-cB_7x2u-a1-m1-cA
20 6sw4-a1-m1-cB 297 29 0.1205 0.0337 0.3448 9.6 6sw4-a1-m1-cA_6sw4-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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