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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=93)
GADIDQASKTEEAAAFRHLLRHLDEHKDVQNIDLIQADFCRNCLAKWLEAATEQGVELDY
DGAREYVYGPFAEWKTLYQKPASEAQLAAFEAK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3fyb-a1-m1-cA 93 93 1.0000 1.0000 1.0000 1.87e-65 3fyb-a1-m1-cB_3fyb-a1-m1-cA
2 3fyb-a1-m1-cB 83 83 0.8925 1.0000 1.0000 9.02e-59 3fyb-a1-m1-cB_3fyb-a1-m1-cA
3 2o35-a1-m2-cB 92 80 0.4624 0.4674 0.5375 1.68e-21 2o35-a1-m1-cA_2o35-a1-m2-cB, 2o35-a1-m1-cB_2o35-a1-m2-cB, 2o35-a1-m2-cA_2o35-a1-m2-cB
4 2o35-a1-m1-cB 92 80 0.4624 0.4674 0.5375 1.68e-21 2o35-a1-m1-cB_2o35-a1-m2-cB
5 2o35-a1-m2-cA 76 65 0.3871 0.4737 0.5538 3.29e-20 2o35-a1-m1-cA_2o35-a1-m2-cA, 2o35-a1-m2-cA_2o35-a1-m2-cB
6 2o35-a1-m1-cA 76 65 0.3871 0.4737 0.5538 3.29e-20 2o35-a1-m1-cA_2o35-a1-m2-cA, 2o35-a1-m1-cA_2o35-a1-m2-cB
7 6an0-a1-m2-cA 433 23 0.0968 0.0208 0.3913 0.93 6an0-a1-m1-cA_6an0-a1-m2-cA
8 6an0-a1-m1-cA 433 23 0.0968 0.0208 0.3913 0.93 6an0-a1-m1-cA_6an0-a1-m2-cA
9 7q62-a1-m1-cB 822 57 0.2151 0.0243 0.3509 1.0 7q62-a1-m1-cB_7q62-a1-m1-cA
10 7q62-a1-m1-cA 1223 57 0.2151 0.0164 0.3509 1.1 7q62-a1-m1-cB_7q62-a1-m1-cA
11 3pj0-a2-m1-cC 349 41 0.1935 0.0516 0.4390 2.9 3pj0-a2-m1-cC_3pj0-a2-m1-cD
12 3pj0-a2-m1-cD 354 41 0.1935 0.0508 0.4390 2.9 3pj0-a2-m1-cC_3pj0-a2-m1-cD
13 3nbu-a3-m1-cF 549 27 0.1290 0.0219 0.4444 4.5 3nbu-a3-m1-cE_3nbu-a3-m1-cF
14 3nbu-a3-m1-cE 549 27 0.1290 0.0219 0.4444 4.5 3nbu-a3-m1-cE_3nbu-a3-m1-cF
15 3o4f-a4-m1-cG 279 33 0.1183 0.0394 0.3333 5.2 3o4f-a4-m1-cH_3o4f-a4-m1-cG
16 3o4f-a4-m1-cH 264 33 0.1183 0.0417 0.3333 6.6 3o4f-a4-m1-cH_3o4f-a4-m1-cG
17 2ach-a2-m2-cA 337 85 0.2581 0.0712 0.2824 9.3 2ach-a2-m2-cA_2ach-a2-m1-cA
18 2ach-a2-m1-cA 337 85 0.2581 0.0712 0.2824 9.3 2ach-a2-m2-cA_2ach-a2-m1-cA

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Reference:
Jacob Schwartz et al.

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