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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=91)
GADRFLEELPEVAESFKNFREAVRSEGKLTEREKLLISVACSVAVRCDACTRRHAEEALE
AGITEGELAEAAAVAALIRAGSANTASAIFR

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3bey-a1-m1-cD 93 91 1.0000 0.9785 1.0000 1.84e-58 3bey-a1-m1-cF_3bey-a1-m1-cD
2 3bey-a1-m1-cF 91 91 1.0000 1.0000 1.0000 2.38e-58 3bey-a1-m1-cB_3bey-a1-m1-cF, 3bey-a1-m1-cC_3bey-a1-m1-cF, 3bey-a1-m1-cF_3bey-a1-m1-cD
3 3bey-a1-m1-cC 91 91 1.0000 1.0000 1.0000 2.38e-58 3bey-a1-m1-cC_3bey-a1-m1-cF
4 3bey-a1-m1-cB 88 88 0.9670 1.0000 1.0000 3.51e-56 3bey-a1-m1-cB_3bey-a1-m1-cF
5 3bey-a1-m1-cA 88 88 0.9670 1.0000 1.0000 8.09e-56 3bey-a1-m1-cE_3bey-a1-m1-cA
6 3bey-a1-m1-cE 86 86 0.9451 1.0000 1.0000 4.42e-54 3bey-a1-m1-cE_3bey-a1-m1-cA
7 1vke-a1-m1-cF 97 67 0.2637 0.2474 0.3582 2.03e-06 1vke-a1-m1-cF_1vke-a1-m1-cB
8 1vke-a1-m1-cB 101 67 0.2637 0.2376 0.3582 2.19e-06 1vke-a1-m1-cB_1vke-a1-m1-cA, 1vke-a1-m1-cF_1vke-a1-m1-cB
9 1p8c-a1-m1-cF 115 67 0.2637 0.2087 0.3582 3.93e-06 1p8c-a1-m1-cF_1p8c-a1-m1-cE
10 1vke-a1-m1-cA 117 67 0.2637 0.2051 0.3582 4.06e-06 1vke-a1-m1-cB_1vke-a1-m1-cA
11 1p8c-a1-m1-cE 119 67 0.2637 0.2017 0.3582 4.32e-06 1p8c-a1-m1-cC_1p8c-a1-m1-cE, 1p8c-a1-m1-cF_1p8c-a1-m1-cE
12 1p8c-a1-m1-cC 119 67 0.2637 0.2017 0.3582 4.32e-06 1p8c-a1-m1-cC_1p8c-a1-m1-cE
13 3d7i-a1-m2-cB 93 81 0.2527 0.2473 0.2840 0.024 3d7i-a1-m1-cA_3d7i-a1-m2-cB, 3d7i-a1-m2-cC_3d7i-a1-m2-cB
14 3d7i-a1-m2-cC 91 81 0.2527 0.2527 0.2840 0.026 3d7i-a1-m2-cC_3d7i-a1-m1-cA, 3d7i-a1-m2-cC_3d7i-a1-m2-cA, 3d7i-a1-m2-cC_3d7i-a1-m2-cB
15 3d7i-a1-m2-cA 92 81 0.2527 0.2500 0.2840 0.028 3d7i-a1-m2-cC_3d7i-a1-m2-cA
16 3d7i-a1-m1-cA 92 81 0.2527 0.2500 0.2840 0.028 3d7i-a1-m1-cA_3d7i-a1-m2-cB, 3d7i-a1-m2-cC_3d7i-a1-m1-cA
17 2oyo-a1-m3-cB 184 59 0.2088 0.1033 0.3220 0.57 2oyo-a1-m2-cA_2oyo-a1-m3-cB, 2oyo-a1-m3-cA_2oyo-a1-m3-cB
18 2oyo-a1-m3-cA 184 59 0.2088 0.1033 0.3220 0.57 2oyo-a1-m3-cA_2oyo-a1-m3-cB
19 2oyo-a1-m2-cA 184 59 0.2088 0.1033 0.3220 0.57 2oyo-a1-m2-cA_2oyo-a1-m3-cB
20 5w48-a1-m1-cB 448 69 0.1758 0.0357 0.2319 1.4 5w48-a1-m1-cB_5w48-a1-m1-cA
21 5w48-a1-m1-cA 452 69 0.1758 0.0354 0.2319 1.5 5w48-a1-m1-cB_5w48-a1-m1-cA
22 4f7r-a1-m1-cB 237 45 0.1648 0.0633 0.3333 3.1 4f7r-a1-m1-cA_4f7r-a1-m1-cB
23 4f7r-a1-m1-cA 236 45 0.1648 0.0636 0.3333 3.3 4f7r-a1-m1-cA_4f7r-a1-m1-cB
24 6k40-a6-m1-cJ 185 39 0.1429 0.0703 0.3333 5.0 6k40-a6-m1-cI_6k40-a6-m1-cJ
25 6k40-a6-m1-cI 185 39 0.1429 0.0703 0.3333 5.0 6k40-a6-m1-cI_6k40-a6-m1-cJ
26 6x34-a1-m1-cF 3715 31 0.1319 0.0032 0.3871 6.1 6x34-a1-m1-cF_6x34-a1-m1-cH
27 6w1n-a1-m1-cH 3719 31 0.1319 0.0032 0.3871 6.1 6w1n-a1-m1-cF_6w1n-a1-m1-cH
28 6w1n-a1-m1-cF 3719 31 0.1319 0.0032 0.3871 6.1 6w1n-a1-m1-cF_6w1n-a1-m1-cH
29 6x35-a1-m1-cK 3801 31 0.1319 0.0032 0.3871 6.1 6x35-a1-m1-cH_6x35-a1-m1-cK
30 6x35-a1-m1-cH 3801 31 0.1319 0.0032 0.3871 6.1 6x35-a1-m1-cH_6x35-a1-m1-cK
31 6x34-a1-m1-cH 3715 31 0.1319 0.0032 0.3871 6.2 6x34-a1-m1-cF_6x34-a1-m1-cH
32 2xme-a5-m1-cI 199 45 0.1319 0.0603 0.2667 9.1 2xme-a5-m1-cI_2xme-a5-m1-cJ

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Reference:
Jacob Schwartz et al.

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