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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=63)
GAKNVIVLNAASAAGNHGFFWGLLVVTLAWHVKGRLVPGATYLSLGVWPLLLVRLLRPHR
ALA

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2m6x-a1-m1-cF 63 63 1.0000 1.0000 1.0000 2.24e-38 2m6x-a1-m1-cD_2m6x-a1-m1-cF, 2m6x-a1-m1-cE_2m6x-a1-m1-cF
2 2m6x-a1-m1-cE 63 63 1.0000 1.0000 1.0000 2.24e-38 2m6x-a1-m1-cB_2m6x-a1-m1-cE, 2m6x-a1-m1-cE_2m6x-a1-m1-cF
3 2m6x-a1-m1-cD 63 63 1.0000 1.0000 1.0000 2.24e-38 2m6x-a1-m1-cD_2m6x-a1-m1-cF
4 2m6x-a1-m1-cB 63 63 1.0000 1.0000 1.0000 2.24e-38 2m6x-a1-m1-cB_2m6x-a1-m1-cE
5 6g6q-a6-m1-cL 157 28 0.1746 0.0701 0.3929 4.3 6g6q-a6-m1-cK_6g6q-a6-m1-cL
6 6g6q-a6-m1-cL 157 28 0.1746 0.0701 0.3929 4.3 6g6q-a6-m1-cK_6g6q-a6-m1-cL
7 6g6q-a6-m1-cK 156 28 0.1746 0.0705 0.3929 4.5 6g6q-a6-m1-cK_6g6q-a6-m1-cL
8 6g6q-a6-m1-cK 156 28 0.1746 0.0705 0.3929 4.5 6g6q-a6-m1-cK_6g6q-a6-m1-cL
9 4mem-a3-m1-cA 212 24 0.1587 0.0472 0.4167 6.4 4mem-a3-m1-cA_4mem-a3-m2-cB
10 4mem-a3-m2-cB 216 24 0.1587 0.0463 0.4167 6.4 4mem-a3-m1-cA_4mem-a3-m2-cB

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Reference:
Jacob Schwartz et al.

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