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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=46)
GALEEKVEQLGSSLDTLQTRFARLLAEYNATQMKMKQRLSQLESQV

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 3swy-a1-m1-cC 46 46 1.0000 1.0000 1.0000 6.32e-27 3swy-a1-m1-cA_3swy-a1-m1-cC
2 3swy-a1-m1-cA 46 46 1.0000 1.0000 1.0000 6.32e-27 3swy-a1-m1-cA_3swy-a1-m1-cC
3 3a6m-a1-m1-cA 168 44 0.2826 0.0774 0.2955 0.82 3a6m-a1-m1-cB_3a6m-a1-m1-cA
4 5wme-a1-m1-cB 92 34 0.2609 0.1304 0.3529 0.89 5wme-a1-m1-cD_5wme-a1-m1-cB
5 3a6m-a1-m1-cB 164 44 0.2826 0.0793 0.2955 0.90 3a6m-a1-m1-cB_3a6m-a1-m1-cA
6 5wme-a1-m1-cC 93 34 0.2609 0.1290 0.3529 0.95 5wme-a1-m1-cD_5wme-a1-m1-cC
7 5wme-a1-m1-cA 91 34 0.2609 0.1319 0.3529 1.1 5wme-a1-m1-cD_5wme-a1-m1-cA
8 5wme-a1-m1-cD 89 34 0.2609 0.1348 0.3529 1.1 5wme-a1-m1-cD_5wme-a1-m1-cA, 5wme-a1-m1-cD_5wme-a1-m1-cB, 5wme-a1-m1-cD_5wme-a1-m1-cC
9 3lg7-a1-m1-cB 123 22 0.1957 0.0732 0.4091 4.9 3lg7-a1-m1-cC_3lg7-a1-m1-cB
10 6unc-a6-m3-cD 272 25 0.1957 0.0331 0.3600 5.0 6unc-a6-m3-cD_6unc-a6-m1-cC
11 6unc-a6-m1-cC 276 25 0.1957 0.0326 0.3600 5.0 6unc-a6-m3-cD_6unc-a6-m1-cC
12 3lg7-a1-m1-cC 122 22 0.1957 0.0738 0.4091 5.2 3lg7-a1-m1-cC_3lg7-a1-m1-cB
13 3k1t-a1-m2-cA 414 25 0.2174 0.0242 0.4000 7.3 3k1t-a1-m1-cA_3k1t-a1-m2-cA
14 3k1t-a1-m1-cA 414 25 0.2174 0.0242 0.4000 7.3 3k1t-a1-m1-cA_3k1t-a1-m2-cA
15 4ce0-a1-m2-cA 213 22 0.2391 0.0516 0.5000 8.7 4ce0-a1-m1-cA_4ce0-a1-m2-cA
16 4ce0-a1-m1-cA 213 22 0.2391 0.0516 0.5000 8.7 4ce0-a1-m1-cA_4ce0-a1-m2-cA
17 2o7h-a2-m1-cF 31 22 0.2609 0.3871 0.5455 9.6 2o7h-a2-m1-cE_2o7h-a2-m1-cF
18 2o7h-a2-m1-cE 31 22 0.2609 0.3871 0.5455 9.6 2o7h-a2-m1-cE_2o7h-a2-m1-cF

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Reference:
Jacob Schwartz et al.

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