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I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=81)
GAMATFTANFKDTDLKSFIETVGANLNKTIIMGPGVQGKVSIRTMTPLNERQYYQLFLNL
LEAQGYAVVPMENDVLKVVKS

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 4jtm-a1-m2-cB 81 81 1.0000 1.0000 1.0000 7.15e-56 4jtm-a1-m1-cA_4jtm-a1-m2-cB
2 4jtm-a1-m1-cA 81 81 1.0000 1.0000 1.0000 7.15e-56 4jtm-a1-m1-cA_4jtm-a1-m2-cB
3 3ezj-a4-m1-cG 199 78 0.9136 0.3719 0.9487 4.70e-47 3ezj-a4-m1-cC_3ezj-a4-m1-cG
4 3ezj-a3-m3-cG 199 78 0.9136 0.3719 0.9487 4.70e-47 3ezj-a3-m1-cC_3ezj-a3-m3-cG
5 3ezj-a4-m1-cC 197 76 0.8889 0.3655 0.9474 1.52e-45 3ezj-a4-m1-cC_3ezj-a4-m1-cG
6 3ezj-a3-m1-cC 197 76 0.8889 0.3655 0.9474 1.52e-45 3ezj-a3-m1-cC_3ezj-a3-m3-cG
7 4e9j-a1-m1-cB 208 66 0.2840 0.1106 0.3485 3.29e-10 4e9j-a1-m1-cB_4e9j-a1-m1-cA
8 4e9j-a1-m1-cA 217 76 0.3086 0.1152 0.3289 3.54e-10 4e9j-a1-m1-cB_4e9j-a1-m1-cA
9 3jc9-a1-m1-cQl 418 34 0.1481 0.0287 0.3529 0.30 3jc9-a1-m1-cQk_3jc9-a1-m1-cQl
10 3jc9-a1-m1-cQk 418 34 0.1481 0.0287 0.3529 0.30 3jc9-a1-m1-cQk_3jc9-a1-m1-cQl
11 8hi4-a1-m1-cA 1181 57 0.2222 0.0152 0.3158 4.3 8hi4-a1-m1-cA_8hi4-a1-m1-cB
12 8hi4-a1-m1-cB 1187 57 0.2222 0.0152 0.3158 4.3 8hi4-a1-m1-cA_8hi4-a1-m1-cB
13 1r1d-a1-m1-cB 234 42 0.1605 0.0556 0.3095 4.5 1r1d-a1-m1-cA_1r1d-a1-m1-cB
14 1r1d-a1-m1-cA 234 42 0.1605 0.0556 0.3095 4.5 1r1d-a1-m1-cA_1r1d-a1-m1-cB
15 3r5c-a1-m1-cC 335 71 0.2346 0.0567 0.2676 7.7 3r5c-a1-m1-cC_3r5c-a1-m1-cB
16 3r5c-a1-m1-cB 337 71 0.2346 0.0564 0.2676 8.0 3r5c-a1-m1-cC_3r5c-a1-m1-cB

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Reference:
Jacob Schwartz et al.

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