Home Research COVID-19 Services Publications People Teaching Job Opening News Forum
Online Services

I-TASSER I-TASSER-MTD C-I-TASSER CR-I-TASSER QUARK C-QUARK LOMETS MUSTER CEthreader SEGMER DeepFold DeepFoldRNA FoldDesign COFACTOR COACH MetaGO TripletGO IonCom FG-MD ModRefiner REMO DEMO DEMO-EM SPRING COTH Threpp PEPPI BSpred ANGLOR EDock BSP-SLIM SAXSTER FUpred ThreaDom ThreaDomEx EvoDesign BindProf BindProfX SSIPe GPCR-I-TASSER MAGELLAN ResQ STRUM DAMpred

TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=87)
GAMEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHGKYR
IPADVDPLTITSSMSSDGVLTVNGPRK

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 2y1z-a1-m1-cB 87 87 1.0000 1.0000 1.0000 5.20e-60 2y1z-a1-m1-cA_2y1z-a1-m1-cB
2 6bp9-a1-m1-cB 89 87 0.9655 0.9438 0.9655 1.20e-57 6bp9-a1-m1-cA_6bp9-a1-m1-cB
3 6bp9-a1-m1-cA 89 87 0.9655 0.9438 0.9655 1.20e-57 6bp9-a1-m1-cA_6bp9-a1-m1-cB
4 2y1z-a1-m1-cA 85 84 0.9655 0.9882 1.0000 1.37e-57 2y1z-a1-m1-cA_2y1z-a1-m1-cB
5 3j07-a1-m1-cX 175 87 0.9540 0.4743 0.9540 1.38e-55 3j07-a1-m1-cG_3j07-a1-m1-cX, 3j07-a1-m1-cS_3j07-a1-m1-cX, 3j07-a1-m1-cW_3j07-a1-m1-cX
6 3j07-a1-m1-cW 175 87 0.9540 0.4743 0.9540 1.38e-55 3j07-a1-m1-cI_3j07-a1-m1-cW, 3j07-a1-m1-cW_3j07-a1-m1-cX
7 3j07-a1-m1-cS 175 87 0.9540 0.4743 0.9540 1.38e-55 3j07-a1-m1-cS_3j07-a1-m1-cX
8 3j07-a1-m1-cI 175 87 0.9540 0.4743 0.9540 1.38e-55 3j07-a1-m1-cI_3j07-a1-m1-cW
9 3j07-a1-m1-cG 175 87 0.9540 0.4743 0.9540 1.38e-55 3j07-a1-m1-cG_3j07-a1-m1-cX
10 2ygd-a1-m1-cX 175 87 0.9540 0.4743 0.9540 1.38e-55 2ygd-a1-m1-cU_2ygd-a1-m1-cX, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
11 2ygd-a1-m1-cW 175 87 0.9540 0.4743 0.9540 1.38e-55 2ygd-a1-m1-cC_2ygd-a1-m1-cW, 2ygd-a1-m1-cW_2ygd-a1-m1-cX
12 2ygd-a1-m1-cV 175 87 0.9540 0.4743 0.9540 1.38e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cV
13 2ygd-a1-m1-cU 175 87 0.9540 0.4743 0.9540 1.38e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cU_2ygd-a1-m1-cX
14 2ygd-a1-m1-cF 175 87 0.9540 0.4743 0.9540 1.38e-55 2ygd-a1-m1-cF_2ygd-a1-m1-cU, 2ygd-a1-m1-cF_2ygd-a1-m1-cV
15 2ygd-a1-m1-cC 175 87 0.9540 0.4743 0.9540 1.38e-55 2ygd-a1-m1-cC_2ygd-a1-m1-cW
16 2n0k-a1-m1-cB 89 87 0.9425 0.9213 0.9425 1.41e-55 2n0k-a1-m1-cA_2n0k-a1-m1-cB
17 2n0k-a1-m1-cA 89 87 0.9425 0.9213 0.9425 1.41e-55 2n0k-a1-m1-cA_2n0k-a1-m1-cB
18 3l1g-a1-m2-cA 95 83 0.9310 0.8526 0.9759 4.80e-55 3l1g-a1-m1-cA_3l1g-a1-m2-cA
19 3l1g-a1-m1-cA 95 83 0.9310 0.8526 0.9759 4.80e-55 3l1g-a1-m1-cA_3l1g-a1-m2-cA
20 4m5t-a3-m1-cG 86 83 0.9195 0.9302 0.9639 4.57e-54 4m5t-a3-m1-cC_4m5t-a3-m1-cG
21 4m5t-a3-m1-cE 85 83 0.9195 0.9412 0.9639 5.17e-54 4m5t-a3-m1-cC_4m5t-a3-m1-cE
22 4m5t-a3-m1-cC 85 83 0.9080 0.9294 0.9518 1.68e-51 4m5t-a3-m1-cA_4m5t-a3-m1-cC, 4m5t-a3-m1-cC_4m5t-a3-m1-cE, 4m5t-a3-m1-cC_4m5t-a3-m1-cG
23 2y1y-a1-m2-cA 77 78 0.8736 0.9870 0.9744 5.40e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
24 2y1y-a1-m1-cA 77 78 0.8736 0.9870 0.9744 5.40e-49 2y1y-a1-m1-cA_2y1y-a1-m2-cA
25 4m5t-a3-m1-cA 82 83 0.8736 0.9268 0.9157 1.79e-48 4m5t-a3-m1-cA_4m5t-a3-m1-cC
26 3n3e-a1-m1-cA 106 86 0.5632 0.4623 0.5698 1.85e-34 3n3e-a1-m1-cB_3n3e-a1-m1-cA
27 3n3e-a1-m1-cB 104 83 0.5517 0.4615 0.5783 8.93e-34 3n3e-a1-m1-cB_3n3e-a1-m1-cA
28 6dv5-a1-m1-cF 163 84 0.5172 0.2761 0.5357 5.52e-28 6dv5-a1-m1-cF_6dv5-a1-m1-cU
29 6dv5-a1-m1-cK 175 84 0.5172 0.2571 0.5357 6.18e-28 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
30 6dv5-a1-m1-cX 166 84 0.5172 0.2711 0.5357 6.58e-28 6dv5-a1-m1-cP_6dv5-a1-m1-cX
31 6dv5-a1-m1-cU 175 84 0.5172 0.2571 0.5357 6.59e-28 6dv5-a1-m1-cF_6dv5-a1-m1-cU
32 6dv5-a1-m1-cJ 162 84 0.5172 0.2778 0.5357 9.26e-28 6dv5-a1-m1-cJ_6dv5-a1-m1-cK
33 6dv5-a1-m1-cP 164 75 0.4943 0.2622 0.5733 1.56e-26 6dv5-a1-m1-cP_6dv5-a1-m1-cX
34 6f2r-a1-m1-cC 121 83 0.4253 0.3058 0.4458 6.31e-25 6f2r-a1-m1-cD_6f2r-a1-m1-cC
35 6f2r-a1-m1-cD 80 76 0.3908 0.4250 0.4474 3.93e-23 6f2r-a1-m1-cD_6f2r-a1-m1-cC
36 2bol-a1-m1-cB 290 66 0.2299 0.0690 0.3030 0.004 2bol-a1-m1-cB_2bol-a1-m1-cA
37 2bol-a1-m1-cB 290 74 0.2184 0.0655 0.2568 1.2 2bol-a1-m1-cB_2bol-a1-m1-cA
38 2bol-a1-m1-cA 301 66 0.2299 0.0664 0.3030 0.14 2bol-a1-m1-cB_2bol-a1-m1-cA
39 2bol-a1-m1-cA 301 74 0.2069 0.0598 0.2432 1.3 2bol-a1-m1-cB_2bol-a1-m1-cA
40 3sgr-a3-m3-cF 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a3-m1-cC_3sgr-a3-m3-cF, 3sgr-a3-m3-cB_3sgr-a3-m3-cF, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
41 3sgr-a3-m3-cE 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cE_3sgr-a3-m3-cF
42 3sgr-a3-m3-cB 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a3-m1-cD_3sgr-a3-m3-cB, 3sgr-a3-m3-cB_3sgr-a3-m3-cE, 3sgr-a3-m3-cB_3sgr-a3-m3-cF
43 3sgr-a3-m1-cD 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a3-m1-cD_3sgr-a3-m3-cB
44 3sgr-a2-m1-cE 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a2-m1-cA_3sgr-a2-m1-cE
45 3sgr-a2-m1-cB 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a2-m1-cA_3sgr-a2-m1-cB
46 3sgr-a2-m1-cA 25 20 0.1494 0.5200 0.6500 1.8 3sgr-a2-m1-cA_3sgr-a2-m1-cB, 3sgr-a2-m1-cA_3sgr-a2-m1-cE
47 3sgr-a3-m1-cC 24 20 0.1494 0.5417 0.6500 2.0 3sgr-a3-m1-cC_3sgr-a3-m3-cF
48 4c65-a2-m3-cH 429 51 0.2069 0.0420 0.3529 3.1 4c65-a2-m3-cH_4c65-a2-m1-cE, 4c65-a2-m3-cH_4c65-a2-m3-cG
49 4c65-a1-m2-cC 433 51 0.2069 0.0416 0.3529 3.2 4c65-a1-m2-cC_4c65-a1-m2-cA
50 4c65-a2-m3-cG 431 51 0.2069 0.0418 0.3529 3.3 4c65-a2-m3-cH_4c65-a2-m3-cG
51 4c65-a2-m1-cE 435 51 0.2069 0.0414 0.3529 3.3 4c65-a2-m3-cH_4c65-a2-m1-cE
52 4c65-a1-m2-cA 436 51 0.2069 0.0413 0.3529 3.3 4c65-a1-m2-cC_4c65-a1-m2-cA
53 3msu-a1-m1-cA 415 27 0.0920 0.0193 0.2963 6.8 3msu-a1-m1-cA_3msu-a1-m1-cB
54 3msu-a1-m1-cB 426 27 0.0920 0.0188 0.2963 7.2 3msu-a1-m1-cA_3msu-a1-m1-cB
55 1pn0-a3-m2-cB 652 64 0.1954 0.0261 0.2656 8.4 1pn0-a3-m1-cA_1pn0-a3-m2-cB, 1pn0-a3-m2-cB_1pn0-a3-m2-cD
56 1pn0-a3-m1-cA 652 64 0.1954 0.0261 0.2656 8.4 1pn0-a3-m1-cA_1pn0-a3-m2-cB
57 1pn0-a3-m2-cD 656 64 0.1954 0.0259 0.2656 8.6 1pn0-a3-m2-cB_1pn0-a3-m2-cD
58 3cu7-a3-m1-cA 1625 81 0.2874 0.0154 0.3086 8.7 3cu7-a3-m1-cB_3cu7-a3-m1-cA

[Back]
Reference:
Jacob Schwartz et al.

petefredumich.edu | 1150 W. Medical Center Dr., Ann Arbor, MI 48109-0600