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TM-score TM-align US-align MM-align RNA-align NW-align LS-align EDTSurf MVP MVP-Fit SPICKER HAAD PSSpred 3DRobot MR-REX I-TASSER-MR SVMSEQ NeBcon ResPRE TripletRes DeepPotential WDL-RF ATPbind DockRMSD DeepMSA FASPR EM-Refiner GPU-I-TASSER

BioLiP E. coli GLASS GPCR-HGmod GPCR-RD GPCR-EXP Tara-3D TM-fold DECOYS POTENTIAL RW/RWplus EvoEF HPSF THE-DB ADDRESS Alpaca-Antibody CASP7 CASP8 CASP9 CASP10 CASP11 CASP12 CASP13 CASP14

HomodimerDB
>protein (length=49)
GAMEQWCSERLDNQKELMEELYEEKLKILKESLTTFYQEQIQERDEKIE

# Hit Hit
length
Aligned
length
Identity
(normalized by query)
Identity
(normalized by hit)
Identity (normalized
by aligned length)
E-value Dimers
1 5lef-a1-m1-cC 49 49 1.0000 1.0000 1.0000 8.99e-29 5lef-a1-m1-cD_5lef-a1-m1-cC
2 5lef-a1-m1-cD 47 47 0.9592 1.0000 1.0000 1.36e-27 5lef-a1-m1-cD_5lef-a1-m1-cC
3 6yip-a1-m1-cA 71 46 0.7959 0.5493 0.8478 1.01e-21 6yip-a1-m1-cB_6yip-a1-m1-cA
4 6yip-a1-m1-cB 62 46 0.7959 0.6290 0.8478 1.53e-21 6yip-a1-m1-cB_6yip-a1-m1-cA
5 2yii-a1-m1-cB 649 45 0.2857 0.0216 0.3111 0.25 2yii-a1-m1-cD_2yii-a1-m1-cB
6 3agr-a1-m2-cB 591 38 0.2653 0.0220 0.3421 2.7 3agr-a1-m1-cA_3agr-a1-m2-cB, 3agr-a1-m1-cB_3agr-a1-m2-cB, 3agr-a1-m2-cA_3agr-a1-m2-cB
7 3agr-a1-m2-cA 591 38 0.2653 0.0220 0.3421 2.7 3agr-a1-m2-cA_3agr-a1-m2-cB
8 3agr-a1-m1-cB 591 38 0.2653 0.0220 0.3421 2.7 3agr-a1-m1-cB_3agr-a1-m2-cB
9 3agr-a1-m1-cA 591 38 0.2653 0.0220 0.3421 2.7 3agr-a1-m1-cA_3agr-a1-m2-cB
10 6k31-a1-m1-cB 1092 39 0.2449 0.0110 0.3077 9.9 6k31-a1-m1-cB_6k31-a1-m1-cA
11 6k31-a1-m1-cA 1093 39 0.2449 0.0110 0.3077 9.9 6k31-a1-m1-cB_6k31-a1-m1-cA

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Reference:
Jacob Schwartz et al.

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